RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 GBP3Q9H0R5 595 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 ADGRG1Q9Y653 693 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 SCN5AQ14524 2016 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 EVPLQ92817 2033 aa5.23□□□□□ -1.57
EDEM3-203ENST00000439962 PP2D1A8MPX8 630 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 EML1O00423 815 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 FOSP01100 380 aaPredicted RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 SSBP05455 408 aaKnown RBP eCLIP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CKBP12277 381 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CA8P35219 290 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CDR1P51861 262 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 DEFB103AP81534 67 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 DRP2Q13474 957 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 GRIK4Q16099 956 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 MEA1Q16626 185 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 PPP4R3AQ6IN85 833 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 MIER3Q7Z3K6 550 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NEK8Q86SG6 692 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 GOLGA1Q92805 767 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 EPSTI1Q96J88 318 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 PCYT2Q99447 389 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 OSMRQ99650 979 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TSEN34Q9BSV6 310 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NOC4LQ9BVI4 516 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NUCKS1Q9H1E3 243 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 UNC45AQ9H3U1 944 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 HAUS4Q9H6D7 363 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CDHR5Q9HBB8 845 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF302Q9NR11 478 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 GTF2IRD1Q9UHL9 959 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CAPN11Q9UMQ6 739 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 UBIAD1Q9Y5Z9 338 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 V9GYY5 206 aaPredicted RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC151A5D8V7 595 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 RSPH10B2B2RC85 870 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KCNJ18B7U540 433 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NKRFO15226 690 aaKnown RBP eCLIP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 EDIL3O43854 480 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ZRANB2O95218 330 aaKnown RBP eCLIP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 FGBP02675 491 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 RSPH10BP0C881 870 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 SRGAP2CP0DJJ0 459 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TGFB3P10600 412 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CD44P16070 742 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CCNE1P24864 410 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KLRC1P26715 233 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 HNRNPH3P31942 346 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 UBA7P41226 1012 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CDK7P50613 346 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KRT83P78385 493 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 LRRC63Q05C16 580 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KCNJ12Q14500 433 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KRT31Q15323 416 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 HYIQ5T013 277 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 MFSD5Q6N075 450 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NFRKBQ6P4R8 1299 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 RASSF8Q8NHQ8 419 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF507Q8TCN5 953 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 MORC4Q8TE76 937 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NELFBQ8WX92 580 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ARNTL2Q8WYA1 636 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ZNF592Q92610 1267 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 DHX38Q92620 1227 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CALML4Q96GE6 196 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 NLRP4Q96MN2 994 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ERGIC2Q96RQ1 377 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TSGA10Q9BZW7 698 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 UPF3AQ9H1J1 476 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TMEM60Q9H2L4 133 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 PRDM12Q9H4Q4 367 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 SAMSN1Q9NSI8 373 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ABHD10Q9NUJ1 306 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TRMT1Q9NXH9 659 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ERAP1Q9NZ08 941 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 MAGEC2Q9UBF1 373 aaPredicted RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TBX21Q9UL17 535 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 DAAM1Q9Y4D1 1078 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 BDP1A6H8Y1 2624 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KDM3AQ9Y4C1 1321 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 IGLV3-22A0A075B6J6 115 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ANO9A1A5B4 782 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KLRC4O43908 158 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 F2P00734 622 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 IQCF3P0C7M6 154 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 SUPT20HL2P0C7V6 817 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CD52P31358 61 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CLK2P49760 499 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ITIH3Q06033 890 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 AP3B2Q13367 1082 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 IL17AQ16552 155 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CALCRLQ16602 461 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TCTN1Q2MV58 587 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TSR1Q2NL82 804 aaKnown RBP5.22□□□□□ -1.57
EDEM3-203ENST00000439962 KMT5BQ4FZB7 885 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 TMCO3Q6UWJ1 677 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 LRRC8DQ7L1W4 858 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 ANKRD33Q7Z3H0 272 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 SRGAP1Q7Z6B7 1085 aa5.22□□□□□ -1.57
EDEM3-203ENST00000439962 CCDC155Q8N6L0 562 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms