RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CCNE1P24864 410 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 GUCY2CP25092 1073 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ALDH5A1P51649 535 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC12A3P55017 1021 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 HUNKP57058 714 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 UBASH3AP57075 661 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 GSDMDP57764 484 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 PSMC5P62195 406 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ERVK-24P63145 666 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC63Q05C16 580 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 FMR1Q06787 632 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 EHHADHQ08426 723 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ITGB3BPQ13352 177 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 NEDD9Q14511 834 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 LBRQ14739 615 aaKnown RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ARSHQ5FYA8 562 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 HERC4Q5GLZ8 1057 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM26FQ5R3K3 315 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 CDKAL1Q5VV42 579 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 MIS18BP1Q6P0N0 1132 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 OTUD6AQ7L8S5 288 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 DYMQ7RTS9 669 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNK18Q7Z418 384 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZSCAN30Q86W11 494 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 NLRP8Q86W28 1048 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 C4orf19Q8IY42 314 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 SMYD4Q8IYR2 804 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 MYOCDQ8IZQ8 938 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM133AQ8N9E0 248 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC17A8Q8NDX2 589 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 IL31RAQ8NI17 732 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 LRRC15Q8TF66 581 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 BRI3BPQ8WY22 251 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ATP6V0A1Q93050 837 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 P2RX5Q93086 422 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 COL26A1Q96A83 441 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 DNAJC19Q96DA6 116 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 DYDC2Q96IM9 177 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 CCDC43Q96MW1 224 aaKnown RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 UIMC1Q96RL1 719 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 PARK7Q99497 189 aaKnown RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 MMP19Q99542 508 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 LXNQ9BS40 222 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 NUCKS1Q9H1E3 243 aaKnown RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 HSD3B7Q9H2F3 369 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 BHMT2Q9H2M3 363 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 JPH1Q9HDC5 661 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 NMRK2Q9NPI5 230 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ANKEF1Q9NU02 776 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC5A4Q9NY91 659 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 IFNKQ9P0W0 207 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAGEC2Q9UBF1 373 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 MORF4L1Q9UBU8 362 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 SEL1LQ9UBV2 794 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 SLC9A2Q9UBY0 812 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNG1Q9UIX4 513 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 ODF2LQ9ULJ1 636 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 CTNND2Q9UQB3 1225 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 COL4A3BPQ9Y5P4 624 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 GPC6Q9Y625 555 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 PLXNA1Q9UIW2 1896 aa4.39□□□□□ -1.71
HMGB1P37-201ENST00000439613 PLXNB2O15031 1838 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 DNAJC25-GNG10A0A024R161 153 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 BTBD19C9JJ37 291 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 H3BRB1 525 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 DDX39AO00148 427 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 TNFRSF10BO14763 440 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ATP9AO75110 1047 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 WFS1O76024 890 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM13AO94988 1023 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 GNA14O95837 355 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 THBS1P07996 1170 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 TPM1P09493 284 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAPTP10636 758 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 KCNA2P16389 499 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 MSNP26038 577 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 RPL13P26373 211 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 MAPK4P31152 587 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ABCD1P33897 745 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF157P51786 506 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ZNF131P52739 623 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 STX17P56962 302 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ACTR2P61160 394 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 PSMC6P62333 389 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CNTN2Q02246 1040 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CYP4A11Q02928 519 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 SREBF2Q12772 1141 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 NFX1Q12986 1120 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 STK4Q13043 487 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 COASYQ13057 564 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ALCAMQ13740 583 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 GIT2Q14161 759 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CTTNQ14247 550 aaKnown RBP4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 ECM1Q16610 540 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 FAM110CQ1W6H9 321 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 WDR78Q5VTH9 848 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CST9Q5W186 159 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 CENPPQ6IPU0 288 aa4.38□□□□□ -1.71
HMGB1P37-201ENST00000439613 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms