RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RALGAPA2Q2PPJ7 1873 aa11.61□□□□□ -0.55
MCF2L-216ENST00000439475 NLRC5Q86WI3 1866 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 LRRIQ4A6NIV6 560 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 RBAK-RBAKDNI3L0D1 243 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 EYA4O95677 639 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 LAG3P18627 525 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 GLRA2P23416 452 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 UBA7P41226 1012 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 SF3A1Q15459 793 aaKnown RBP11.6□□□□□ -0.55
MCF2L-216ENST00000439475 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
MCF2L-216ENST00000439475 TIGD5Q53EQ6 642 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 NOTUMQ6P988 496 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 ATXN2LQ8WWM7 1075 aaKnown RBP11.6□□□□□ -0.55
MCF2L-216ENST00000439475 SYMPKQ92797 1274 aaKnown RBP11.6□□□□□ -0.55
MCF2L-216ENST00000439475 KIFAP3Q92845 792 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 CALML4Q96GE6 196 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 PRMT7Q9NVM4 692 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-216ENST00000439475 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
MCF2L-216ENST00000439475 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
MCF2L-216ENST00000439475 NCK2O43639 380 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 STX6O43752 255 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 FGFR1P11362 822 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 NAMPTP43490 491 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 GATMP50440 423 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 UBE3AQ05086 875 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 CAPSQ13938 189 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 BMS1Q14692 1282 aaKnown RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 ECM1Q16610 540 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 ZNF598Q86UK7 904 aaKnown RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 LRRC43Q8N309 656 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 DEPTORQ8TB45 409 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 ASAP3Q8TDY4 903 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 CASD1Q96PB1 797 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 TIPINQ9BVW5 301 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 TRIM6Q9C030 488 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 NSUN3Q9H649 340 aaKnown RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 TYW1Q9NV66 732 aaKnown RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 PCDHB2Q9Y5E7 798 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 LAMA3Q16787 3333 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 FNDC1Q4ZHG4 1894 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-216ENST00000439475 PHLPP2Q6ZVD8 1323 aa11.59□□□□□ -0.55
MCF2L-216ENST00000439475 E9PMD0 336 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 CDC25AP30304 524 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 PPM1AP35813 382 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 MRPS5P82675 430 aaKnown RBP11.58□□□□□ -0.56
MCF2L-216ENST00000439475 KRT17Q04695 432 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 IL17AQ16552 155 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 MAPK6Q16659 721 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 HYIQ5T013 277 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 CABP7Q86V35 215 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 THNSL1Q8IYQ7 743 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 KLHL23Q8NBE8 558 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 URGCPQ8TCY9 931 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 HLA-CQ95604 372 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 DRC1Q96MC2 740 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 ZNF558Q96NG5 402 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 FAM193BQ96PV7 902 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-216ENST00000439475 CSRNP2Q9H175 543 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 MINDY3Q9H8M7 445 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 C17orf75Q9HAS0 396 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 GPRC5CQ9NQ84 441 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 CNTNAP2Q9UHC6 1331 aa11.58□□□□□ -0.56
MCF2L-216ENST00000439475 PRRC2BQ5JSZ5 2229 aaKnown RBP11.58□□□□□ -0.56
MCF2L-216ENST00000439475 PP2D1A8MPX8 630 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 GRM6O15303 877 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 TSPAN1O60635 241 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 SSBP05455 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 LINC00271P0C7V0 271 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 ITGA4P13612 1032 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 NCLP19338 710 aaKnown RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 TXLNAP40222 546 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 ALDH7A1P49419 539 aaKnown RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 EFNA5P52803 228 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 RNASELQ05823 741 aaKnown RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 MBTD1Q05BQ5 628 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 PDE12Q6L8Q7 609 aaKnown RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 KCNT2Q6UVM3 1135 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 APBB1IPQ7Z5R6 666 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 MRPL10Q7Z7H8 261 aaKnown RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 SYT2Q8N9I0 419 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 COLGALT1Q8NBJ5 622 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 SPPL3Q8TCT6 385 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 HELQQ8TDG4 1101 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 MICAL1Q8TDZ2 1067 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 POF1BQ8WVV4 589 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 ZNF396Q96N95 335 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-216ENST00000439475 ADPGKQ9BRR6 497 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 CWH43Q9H720 699 aa11.57□□□□□ -0.56
MCF2L-216ENST00000439475 RSAD1Q9HA92 442 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms