RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.158e-7■■■□□ 15.5
TSC2-206ENST00000439117 SNX5Q9Y5X3 404 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 TMED10P49755 219 aaKnown RBP15.99■□□□□ 0.15
TSC2-206ENST00000439117 TSGA10IPQ3SY00 556 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 TMEM154Q6P9G4 183 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 RASSF3Q86WH2 238 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
TSC2-206ENST00000439117 NACA2Q9H009 215 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 FBXL5Q9UKA1 691 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 HPCAL4Q9UM19 191 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 CAPN11Q9UMQ6 739 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 FAM107AO95990 144 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 KCNA3P22001 575 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 SERPINB4P48594 390 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 GABPAQ06546 454 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 APOBEC3FQ8IUX4 373 aaKnown RBP15.99■□□□□ 0.15
TSC2-206ENST00000439117 DNAJC9Q8WXX5 260 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 FEM1BQ9UK73 627 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 POLR1AO95602 1720 aaPredicted RBP15.99■□□□□ 0.15
TSC2-206ENST00000439117 REREQ9P2R6 1566 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 DCCP43146 1447 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 CCDC22O60826 627 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 KRT1P04264 644 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 SGMS1Q86VZ5 419 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 PROCA1Q8NCQ7 364 aaPredicted RBP15.99■□□□□ 0.15
TSC2-206ENST00000439117 SMYD2Q9NRG4 433 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 TBC1D23Q9NUY8 699 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 HOXC10Q9NYD6 342 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 HDAC6Q9UBN7 1215 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 AGTP01019 485 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 CHRNA3P32297 505 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 TRIP13Q15645 432 aaPredicted RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 THAP11Q96EK4 314 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 HIC2Q96JB3 615 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 ING2Q9H160 280 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 GOLPH3LQ9H4A5 285 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 SCHIP1Q9P0W5 487 aaPredicted RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 AKT3Q9Y243 479 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 F5H6K3 240 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 NVLO15381 856 aaKnown RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 PSAPP07602 524 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 HSPA9P38646 679 aaKnown RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 KLRC3Q07444 240 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 AP1B1Q10567 949 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 SPOUT1Q5T280 376 aaKnown RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 KIAA2013Q8IYS2 634 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 ZNF512BQ96KM6 892 aaPredicted RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 TMEM206Q9H813 350 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 PARVGQ9HBI0 331 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 SAYSD1Q9NPB0 183 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 RNF181Q9P0P0 153 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 IPO11Q9UI26 975 aaKnown RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 HERC5Q9UII4 1024 aaKnown RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 USP15Q9Y4E8 981 aaPredicted RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 A0A1W2PQC6 194 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 USP17L10C9JJH3 530 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 KCNA4P22459 653 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 C12orf60Q5U649 245 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 SEC16BQ96JE7 1060 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 HESX1Q9UBX0 185 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 PCDHA6Q9UN73 950 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 PCDHA8Q9Y5H6 950 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 LRRN2O75325 713 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
TSC2-206ENST00000439117 IQCB1Q15051 598 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 KLHL38Q2WGJ6 581 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 STRIP1Q5VSL9 837 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 NBPF3Q9H094 633 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 SMYD3Q9H7B4 428 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 L2HGDHQ9H9P8 463 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 SENP1Q9P0U3 644 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
TSC2-206ENST00000439117 KRT38O76015 456 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 EPHB1P54762 984 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 SEMA3FQ13275 785 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 SLC44A4Q53GD3 710 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 PDXDC2PQ6P474 469 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 NYAP1Q6ZVC0 841 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 RIOK1Q9BRS2 568 aaKnown RBP15.97■□□□□ 0.15
TSC2-206ENST00000439117 DISC1Q9NRI5 854 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 SNX12Q9UMY4 172 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 ABCD1P33897 745 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 RABGAP1LQ5R372 815 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 PPP1R18Q6NYC8 613 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 GIPC2Q8TF65 315 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
TSC2-206ENST00000439117 CDC27P30260 824 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 ARL4CP56559 192 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 DDX47Q9H0S4 455 aaKnown RBP15.97■□□□□ 0.15
TSC2-206ENST00000439117 GINM1Q9NU53 330 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 DCTN4Q9UJW0 460 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 ZNRF3Q9ULT6 936 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 APOA1P02647 267 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 SPP2Q13103 211 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 MTERF2Q49AM1 385 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 C3orf20Q8ND61 904 aa15.97■□□□□ 0.15
TSC2-206ENST00000439117 CFAP69A5D8W1 941 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms