RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 VPS36Q86VN1 386 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 VSIG1Q86XK7 387 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.42□□□□□ -0.12e-6■■■■■ 54.4
ACTN1-204ENST00000438964 CENPTQ96BT3 561 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 RPS6KC1Q96S38 1066 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 SYT15Q9BQS2 421 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 CDC42EP4Q9H3Q1 356 aaKnown RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 SIX2Q9NPC8 291 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 PCDHA2Q9Y5H9 948 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 ALG6Q9Y672 507 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 BHMG1C9JSJ3 638 aaPredicted RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 GCNT3O95395 438 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 NUDT17P0C025 328 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 CETPP11597 493 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 BRAFP15056 766 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 EPHB2P29323 1055 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 STX2P32856 288 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 CRKLP46109 303 aaKnown RBP14.42□□□□□ -0.1
ACTN1-204ENST00000438964 RIPK1Q13546 671 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 C6orf118Q5T5N4 469 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 ANO7Q6IWH7 933 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 KIAA0825Q8IV33 1275 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 SH3GL3Q99963 347 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 RAB34Q9BZG1 259 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 INTUQ9ULD6 942 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 ABCB11O95342 1321 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 A0A1B0GUL6 1792 aa14.42□□□□□ -0.1
ACTN1-204ENST00000438964 HIP1RO75146 1068 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 PSMD2Q13200 908 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 DNAJC3Q13217 504 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 TMEM119Q4V9L6 283 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 SLFN11Q7Z7L1 901 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 SEC14L1Q92503 715 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 MYLK2Q9H1R3 596 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 BATF3Q9NR55 127 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 IRAK4Q9NWZ3 460 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 G3BP2Q9UN86 482 aaKnown RBP14.41□□□□□ -0.1
ACTN1-204ENST00000438964 AGTP01019 485 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 CALCAP01258 141 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 RFC5P40937 340 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 STAT1P42224 750 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.11e-6■■■■□ 21.1
ACTN1-204ENST00000438964 CYP2J2P51589 502 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 POLE2P56282 527 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 MTM1Q13496 603 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 EPHA7Q15375 998 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 COBLL1Q53SF7 1204 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 EAPPQ56P03 285 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-204ENST00000438964 CNBD1Q8NA66 436 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 TSC22D3Q99576 134 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 ZBTB39O15060 712 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 TOM1O60784 492 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 PYGMP11217 842 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 PCP11498 1178 aaKnown RBP14.41□□□□□ -0.1
ACTN1-204ENST00000438964 GALNT17Q6IS24 598 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 SYCE1Q8N0S2 351 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 PHC3Q8NDX5 983 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 NUDCD1Q96RS6 583 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 REEP2Q9BRK0 252 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 ARHGEF3Q9NR81 526 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 DLGAP2Q9P1A6 1054 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 DNAJC12Q9UKB3 198 aa14.41□□□□□ -0.1
ACTN1-204ENST00000438964 IL6STP40189 918 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-204ENST00000438964 PTGIRP43119 386 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 ADCY2Q08462 1091 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 PICALMQ13492 652 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 GALNTL6Q49A17 601 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 KCTD1Q719H9 257 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 MIGA2Q7L4E1 593 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 SLC35C1Q96A29 364 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 RUSC1Q9BVN2 902 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 MTRF1LQ9UGC7 380 aaKnown RBP14.4□□□□□ -0.1
ACTN1-204ENST00000438964 PPP1R11O60927 126 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-204ENST00000438964 ALADP13716 330 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 CALRP27797 417 aaKnown RBP14.4□□□□□ -0.1
ACTN1-204ENST00000438964 FOXN2P32314 431 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 CDK8P49336 464 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 FAM182AQ5T1J6 154 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 TMEM154Q6P9G4 183 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 C9orf72Q96LT7 481 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 ASIC3Q9UHC3 531 aa14.4□□□□□ -0.1
ACTN1-204ENST00000438964 CORO1CQ9ULV4 474 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-204ENST00000438964 ERVV-1B6SEH8 477 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CES2O00748 559 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 SNUPNO95149 360 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 NR3C1P04150 777 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CHRNB2P17787 502 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 VCAM1P19320 739 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 TNFAIP3P21580 790 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 NMT1P30419 496 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 UBE4AQ14139 1066 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CBWD6Q4V339 395 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 C2CD6Q53TS8 623 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CBWD3Q5JTY5 395 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CBWD5Q5RIA9 395 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CYP4F22Q6NT55 531 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 EIF1ADQ8N9N8 165 aaKnown RBP14.39□□□□□ -0.11
ACTN1-204ENST00000438964 TBC1D16Q8TBP0 767 aa14.39□□□□□ -0.11
ACTN1-204ENST00000438964 CCHCR1Q8TD31 782 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms