RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 JADE2Q9NQC1 790 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 SLC2A4RGQ9NR83 387 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 DPP7Q9UHL4 492 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
CSTF3-203ENST00000438862 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 GPR32O75388 356 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 ATG7O95352 703 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 MAGEA9P43362 315 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 CLCN4P51793 760 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 ACTR2P61160 394 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 KCNC4Q03721 635 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 ACAP1Q15027 740 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 IMMTQ16891 758 aaKnown RBP12.7□□□□□ -0.38
CSTF3-203ENST00000438862 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 RNF169Q8NCN4 708 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 IGSF21Q96ID5 467 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
CSTF3-203ENST00000438862 SPATA6Q9NWH7 488 aaPredicted RBP12.7□□□□□ -0.38
CSTF3-203ENST00000438862 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
CSTF3-203ENST00000438862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSTF3-203ENST00000438862 SMG5Q9UPR3 1016 aaKnown RBP12.7□□□□□ -0.38
CSTF3-203ENST00000438862 NFASCO94856 1347 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 FAM208BQ5VWN6 2430 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 MIA3Q5JRA6 1907 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 SLC30A4O14863 429 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 LILRB5O75023 590 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 IGHDP01880 384 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 CSTF1Q05048 431 aaKnown RBP12.69□□□□□ -0.38
CSTF3-203ENST00000438862 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
CSTF3-203ENST00000438862 NETO1Q8TDF5 533 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 KLHL5Q96PQ7 755 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 SDF4Q9BRK5 362 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 OSBPL6Q9BZF3 934 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 FOXQ1Q9C009 403 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 TSR3Q9UJK0 312 aaKnown RBP12.69□□□□□ -0.38
CSTF3-203ENST00000438862 GMEB2Q9UKD1 530 aa12.69□□□□□ -0.38
CSTF3-203ENST00000438862 RALYQ9UKM9 306 aaKnown RBP12.69□□□□□ -0.38
CSTF3-203ENST00000438862 IGKV6D-21A0A0A0MT36 114 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 KANSL1LA0AUZ9 987 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■□□□ 12.2
CSTF3-203ENST00000438862 LAMP2P13473 410 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 FAM160B1Q5W0V3 765 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 ZNF598Q86UK7 904 aaKnown RBP12.68□□□□□ -0.38
CSTF3-203ENST00000438862 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
CSTF3-203ENST00000438862 NELL1Q92832 810 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 MYADMQ96S97 322 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 KCNH7Q9NS40 1196 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 ANGPTL2Q9UKU9 493 aa12.68□□□□□ -0.38
CSTF3-203ENST00000438862 CLUHO75153 1309 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 ANHXE9PGG2 379 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 VTNP04004 478 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 GALTP07902 379 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 CNPP09543 421 aaKnown RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 PDE1AP54750 535 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 PRKCQQ04759 706 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 NBR1Q14596 966 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 TMEM173Q86WV6 379 aaPredicted RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 METTL13Q8N6R0 699 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 DDX23Q9BUQ8 820 aaKnown RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 FAM126AQ9BYI3 521 aaPredicted RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 ZFP37Q9Y6Q3 630 aaPredicted RBP12.67□□□□□ -0.38
CSTF3-203ENST00000438862 PATJQ8NI35 1801 aa12.67□□□□□ -0.38
CSTF3-203ENST00000438862 BACH1O14867 736 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 LILRB3O75022 631 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 LRP3O75074 770 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 LRRN2O75325 713 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 SMARCA1P28370 1054 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 NLRP11P59045 1033 aaKnown RBP12.66□□□□□ -0.38
CSTF3-203ENST00000438862 TROAPQ12815 778 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 WTAPQ15007 396 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 RSPO2Q6UXX9 243 aaPredicted RBP12.66□□□□□ -0.38
CSTF3-203ENST00000438862 HDAC7Q8WUI4 952 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 PIBF1Q8WXW3 757 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 MXRA8Q9BRK3 442 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 PARD6AQ9NPB6 346 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 MAN1C1Q9NR34 630 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 MRPL17Q9NRX2 175 aaKnown RBP12.66□□□□□ -0.38
CSTF3-203ENST00000438862 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
CSTF3-203ENST00000438862 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 SSX2IPQ9Y2D8 614 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 DOCK8Q8NF50 2099 aa12.66□□□□□ -0.38
CSTF3-203ENST00000438862 ERICH2A1L162 156 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 INPPL1O15357 1258 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 MAGEB2O15479 319 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 PAPLNO95428 1278 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 C22orf31O95567 290 aa12.65□□□□□ -0.38
CSTF3-203ENST00000438862 SKIP12755 728 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms