RNA–Protein interactions for RNA: ENST00000437111.1

SHQ1P1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1, humanhuman

BASIC

Gene SHQ1P1, Length 1,544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1P1-201ENST00000437111 NEK9Q8TD19 979 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 TSC1Q92574 1164 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 HLA-CQ95604 372 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 JAKMIP2Q96AA8 810 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 KIFC2Q96AC6 838 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 CCDC42Q96M95 316 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 PNMA5Q96PV4 448 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 EIF3CQ99613 913 aaKnown RBP6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 DUSP9Q99956 384 aaKnown RBP6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 WDR11Q9BZH6 1224 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 MTIF3Q9H2K0 278 aaKnown RBP6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 NDST4Q9H3R1 872 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 MRPL44Q9H9J2 332 aaKnown RBP6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 SLC39A2Q9NP94 309 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 BLOC1S4Q9NUP1 217 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 TCEAL9Q9UHQ7 104 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 DNM3Q9UQ16 869 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 MRPL11Q9Y3B7 192 aaKnown RBP6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 DAAM1Q9Y4D1 1078 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 PCDHA11Q9Y5I1 949 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 MROH7Q68CQ1 1323 aa6.92□□□□□ -1.3
SHQ1P1-201ENST00000437111 CCDC151A5D8V7 595 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 GCOM1H8Y6P7 765 aaPredicted RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CETN3O15182 167 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PLA2G6O60733 806 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PPP1R11O60927 126 aaPredicted RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 TACC1O75410 805 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CYP3A4P08684 503 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 FCER1AP12319 257 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 AKR1A1P14550 325 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 RPA1P27694 616 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CIITAP33076 1130 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 VAV2P52735 878 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PMS1P54277 932 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 GABPB1Q06547 395 aaPredicted RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 COG2Q14746 738 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 BRD3Q15059 726 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PTPN21Q16825 1174 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ERCC6LQ2NKX8 1250 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 USH1GQ495M9 461 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 MAP9Q49MG5 647 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PRR16Q569H4 304 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 NCAPH2Q6IBW4 605 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 FBXO38Q6PIJ6 1188 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 FAM126BQ8IXS8 530 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 RUBCNQ92622 972 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 UIMC1Q96RL1 719 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 WDR24Q96S15 920 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ARID3AQ99856 593 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 SLF1Q9BQI6 1058 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 TINF2Q9BSI4 451 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 TTYH3Q9C0H2 523 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 MROH8Q9H579 483 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 METTL14Q9HCE5 456 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 TUFT1Q9NNX1 390 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ARFGAP3Q9NP61 516 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 HOXC10Q9NYD6 342 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CEP72Q9P209 647 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 FEM1BQ9UK73 627 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 KIAA1024Q9UPX6 916 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PCDHGA10Q9Y5H3 936 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CACNA1AO00555 2505 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 WDR81Q562E7 1941 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 UMODL1Q5DID0 1318 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ARID2Q68CP9 1835 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 TRANK1O15050 2925 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 A0A0G2JMZ2 1700 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 MYH10P35580 1976 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ARVCFO00192 962 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 MEIS2O14770 477 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 SLC16A3O15427 465 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CD4P01730 458 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 PGK2P07205 417 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 EPB41P11171 864 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ANXA13P27216 316 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 MARSP56192 900 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 EHHADHQ08426 723 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 MTF1Q14872 753 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 HERC4Q5GLZ8 1057 aaPredicted RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 VPS36Q86VN1 386 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 IRF2BP1Q8IU81 584 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 SLC35F6Q8N357 371 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 SAMD3Q8N6K7 520 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ZNF454Q8N9F8 522 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 ACRBPQ8NEB7 543 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 GOLGA5Q8TBA6 731 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CAGE1Q8TC20 777 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 UBE2Q2Q8WVN8 375 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 SYN2Q92777 582 aaPredicted RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 HAS1Q92839 578 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 SECISBP2LQ93073 1101 aaKnown RBP6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 GLT1D1Q96MS3 346 aa6.91□□□□□ -1.3
SHQ1P1-201ENST00000437111 CCDC43Q96MW1 224 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms