RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 EMC2Q15006 297 aa16.74■□□□□ 0.27
NEDD4-202ENST00000435532 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
NEDD4-202ENST00000435532 FAM83AQ86UY5 434 aa16.74■□□□□ 0.27
NEDD4-202ENST00000435532 IFT43Q96FT9 208 aa16.74■□□□□ 0.27
NEDD4-202ENST00000435532 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
NEDD4-202ENST00000435532 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 IL18RAPO95256 599 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 ADORA2BP29275 332 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 PKP1Q13835 747 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 ANKRD20A3Q5VUR7 823 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 PPFIBP2Q8ND30 876 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 NUDCD1Q96RS6 583 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 CXCL11O14625 94 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 SOX5P35711 763 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 RBM41Q96IZ5 413 aaKnown RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 EHD4Q9H223 541 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 ZWILCHQ9H900 591 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 DAAM1Q9Y4D1 1078 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 RNF40O75150 1001 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 DPF3Q92784 378 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 MYBL1P10243 752 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 ZNF131P52739 623 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 NXNQ6DKJ4 435 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 PRMT7Q9NVM4 692 aaPredicted RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 PGRMC1O00264 195 aaKnown RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 MAGED2Q9UNF1 606 aaPredicted RBP16.73■□□□□ 0.27
NEDD4-202ENST00000435532 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
NEDD4-202ENST00000435532 EIF4A3P38919 411 aaKnown RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 ATP2C1P98194 919 aaPredicted RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 TTC13Q8NBP0 860 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 NHEJ1Q9H9Q4 299 aaPredicted RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 TJP3O95049 919 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 KRT3P12035 628 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 EFHC2Q5JST6 749 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 LRRC8AQ8IWT6 810 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 BASP1P80723 227 aaKnown RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 TMEM132DQ14C87 1099 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 TLK1Q9UKI8 766 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 GUCY2FP51841 1108 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 RWDD2BP57060 319 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 PRKCEQ02156 737 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 CAPN12Q6ZSI9 719 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 GPR182O15218 404 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 HOXC6P09630 235 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 GNA15P30679 374 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 FKBP1AP62942 108 aaKnown RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 DRP2Q13474 957 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 SV2CQ496J9 727 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 STKLD1Q8NE28 680 aa16.72■□□□□ 0.27
NEDD4-202ENST00000435532 INTS2Q9H0H0 1204 aaKnown RBP16.72■□□□□ 0.27
NEDD4-202ENST00000435532 PRRG1O14668 218 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 CDK17Q00537 523 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 ARHGAP15Q53QZ3 475 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 MCUR1Q96AQ8 359 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 IL1R1P14778 569 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 NAA35Q5VZE5 725 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 PHLDB2Q86SQ0 1253 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 SAAL1Q96ER3 474 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 SAMSN1Q9NSI8 373 aaKnown RBP16.71■□□□□ 0.27
NEDD4-202ENST00000435532 NOTUMQ6P988 496 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 VSIG1Q86XK7 387 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.27
NEDD4-202ENST00000435532 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 PKNOX2Q96KN3 472 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 COLEC11Q9BWP8 271 aa16.71■□□□□ 0.27
NEDD4-202ENST00000435532 TAP1Q03518 808 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 BRD3Q15059 726 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 DCAF4L1Q3SXM0 396 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 EFCAB12Q6NXP0 572 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 SOCS4Q8WXH5 440 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 MAGEB5Q9BZ81 275 aa16.71■□□□□ 0.26
NEDD4-202ENST00000435532 EFCAB8A8MWE9 144 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 PLS3P13797 630 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 ST8SIA6P61647 398 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 ZNF484Q5JVG2 852 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 TRIM42Q8IWZ5 723 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 DPF2Q92785 391 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 SP110Q9HB58 689 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 MID2Q9UJV3 735 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 PCDHA13Q9Y5I0 950 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 ACCSLQ4AC99 568 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 TJP2Q9UDY2 1190 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 FNDC3AQ9Y2H6 1198 aaKnown RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 TMEM143Q96AN5 459 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 TSPYL2Q9H2G4 693 aaPredicted RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 EFCC1Q9HA90 598 aa16.7■□□□□ 0.26
NEDD4-202ENST00000435532 CNOT8Q9UFF9 292 aaKnown RBP16.7■□□□□ 0.26
NEDD4-202ENST00000435532 BCL9O00512 1426 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms