RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ERVK-9P63128 1117 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 CETN1Q12798 172 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 WDR93Q6P2C0 686 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 DAW1Q8N136 415 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 CAGE1Q8TC20 777 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 BCAS3Q9H6U6 928 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 GCNT4Q9P109 453 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 EXOC7Q9UPT5 735 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 HYOU1Q9Y4L1 999 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 PCDHA10Q9Y5I2 948 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 MYH11P35749 1972 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 TARSL2A2RTX5 802 aaKnown RBP13.98□□□□□ -0.17
DDX56-204ENST00000431640 P4HA2O15460 535 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 N4BP1O75113 896 aaKnown RBP13.98□□□□□ -0.17
DDX56-204ENST00000431640 ACTN1P12814 892 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 RFX1P22670 979 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 SMTNP53814 917 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
DDX56-204ENST00000431640 JAM2P57087 298 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 GTF2BQ00403 316 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 INTS8Q75QN2 995 aaKnown RBP13.98□□□□□ -0.17
DDX56-204ENST00000431640 HVCN1Q96D96 273 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
DDX56-204ENST00000431640 STK33Q9BYT3 514 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 MLXIPQ9HAP2 919 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 C17orf75Q9HAS0 396 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 SIX2Q9NPC8 291 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 A1CFQ9NQ94 594 aaKnown RBP13.98□□□□□ -0.17
DDX56-204ENST00000431640 MORF4L1Q9UBU8 362 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 ADAMTS1Q9UHI8 967 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
DDX56-204ENST00000431640 NFASCO94856 1347 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 A0A087X0T9 212 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ATP9AO75110 1047 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 FAM228BP0C875 321 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ABCD1P33897 745 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 PAFAH1B1P43034 410 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 CYP2J2P51589 502 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 FAM193AP78312 1265 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ARID5AQ03989 594 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 GABPB1Q06547 395 aaPredicted RBP13.97□□□□□ -0.17
DDX56-204ENST00000431640 NOGQ13253 232 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 CRHR2Q13324 411 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
DDX56-204ENST00000431640 KIAA0753Q2KHM9 967 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 XKR9Q5GH70 373 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ZNF572Q7Z3I7 529 aaPredicted RBP13.97□□□□□ -0.17
DDX56-204ENST00000431640 HAUS6Q7Z4H7 955 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
DDX56-204ENST00000431640 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 INPP4AQ96PE3 977 aaPredicted RBP13.97□□□□□ -0.17
DDX56-204ENST00000431640 MMS19Q96T76 1030 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ACAD9Q9H845 621 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 EFCC1Q9HA90 598 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ZCCHC17Q9NP64 241 aaKnown RBP13.97□□□□□ -0.17
DDX56-204ENST00000431640 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 CAPN6Q9Y6Q1 641 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
DDX56-204ENST00000431640 PSAPP07602 524 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 RHOXF2BP0C7M4 288 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 NCKAP1LP55160 1127 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 CAP1Q01518 475 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 APBA1Q02410 837 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 PTK2Q05397 1052 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 SREBF2Q12772 1141 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 BFSP1Q12934 665 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 LONRF2Q1L5Z9 754 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 HDXQ7Z353 690 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 RUBCNQ92622 972 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 FGD4Q96M96 766 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 CYP39A1Q9NYL5 469 aa13.96□□□□□ -0.17
DDX56-204ENST00000431640 SRGAP2O75044 1071 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 TBC1D8O95759 1140 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 CTGFP29279 349 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 MCCD1P59942 119 aaPredicted RBP13.96□□□□□ -0.18
DDX56-204ENST00000431640 GPS2Q13227 327 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 MAP9Q49MG5 647 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.18
DDX56-204ENST00000431640 MAEAQ7L5Y9 396 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 ZNF571Q7Z3V5 609 aaPredicted RBP13.96□□□□□ -0.18
DDX56-204ENST00000431640 NCAPG2Q86XI2 1143 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 CREG2Q8IUH2 290 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 KSR1Q8IVT5 923 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 MMGT1Q8N4V1 131 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 XXYLT1Q8NBI6 393 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 CHST13Q8NET6 341 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 KIFAP3Q92845 792 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 CAPZA3Q96KX2 299 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 OSBPL9Q96SU4 736 aa13.96□□□□□ -0.18
DDX56-204ENST00000431640 MGAMO43451 1857 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 PMM2O15305 246 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 SEC31AO94979 1220 aaKnown RBP13.95□□□□□ -0.18
DDX56-204ENST00000431640 CCNE2O96020 404 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 SOX5P35711 763 aa13.95□□□□□ -0.18
DDX56-204ENST00000431640 INHBEP58166 350 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms