RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ST3GAL5Q9UNP4 418 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 STK24Q9Y6E0 443 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 MYO15AQ9UKN7 3530 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 WDR81Q562E7 1941 aa16.92■□□□□ 0.3
PTCD1-204ENST00000430982 A0A087WZ62 844 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 TMEM221A6NGB7 291 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 M0R296 226 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 GRM6O15303 877 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 USO1O60763 962 aaKnown RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 BMP15O95972 392 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 XRCC6P12956 609 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 DARSP14868 501 aaKnown RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 IBSPP21815 317 aaPredicted RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 EIF4BP23588 611 aaKnown RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 BMPR1AP36894 532 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 CDC42EP1Q00587 391 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 SF3A1Q15459 793 aaKnown RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 ECM1Q16610 540 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 KRT79Q5XKE5 535 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 FAM173BQ6P4H8 233 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 KSR1Q8IVT5 923 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 PSPC1Q8WXF1 523 aaKnown RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 LINC01599Q8WXQ3 324 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 MSLNLQ96KJ4 702 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 FDXACB1Q9BRP7 624 aaPredicted RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 C11orf84Q9BUA3 381 aaPredicted RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 GCOM2Q9BZD3 368 aaPredicted RBP16.91■□□□□ 0.3
PTCD1-204ENST00000430982 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 KIAA1024Q9UPX6 916 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
PTCD1-204ENST00000430982 DENND3A2RUS2 1198 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ARHGEF35A5YM69 484 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 LOC730098B7Z3J9 87 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 DGAT1O75907 488 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 CDC25AP30304 524 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 CTNNB1P35222 781 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ADAM15Q13444 863 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 CAMK1Q14012 370 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 CBX2Q14781 532 aaPredicted RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ZRSR1Q15695 479 aaKnown RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 CLUL1Q15846 466 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ARL6IP4Q66PJ3 421 aaKnown RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 FIBCD1Q8N539 461 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 XPNPEP1Q9NQW7 623 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 DDX19AQ9NUU7 478 aaKnown RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 CD207Q9UJ71 328 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 DBR1Q9UK59 544 aaKnown RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ZFHX2Q9C0A1 2572 aaPredicted RBP16.9■□□□□ 0.3
PTCD1-204ENST00000430982 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
PTCD1-204ENST00000430982 EVPLQ92817 2033 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 CSDE1O75534 798 aaKnown RBP16.89■□□□□ 0.29
PTCD1-204ENST00000430982 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 MUTP22033 750 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 FGFR4P22455 802 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 GTF2F1P35269 517 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTCD1-204ENST00000430982 FOXK2Q01167 660 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 CEBPZQ03701 1054 aaKnown RBP16.89■□□□□ 0.29
PTCD1-204ENST00000430982 LAMTOR4Q0VGL1 99 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 MAEAQ7L5Y9 396 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 RTN4RL1Q86UN2 441 aaPredicted RBP16.89■□□□□ 0.29
PTCD1-204ENST00000430982 PRPF31Q8WWY3 499 aaKnown RBP16.89■□□□□ 0.29
PTCD1-204ENST00000430982 PBXIP1Q96AQ6 731 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 CLIC4Q9Y696 253 aa16.89■□□□□ 0.29
PTCD1-204ENST00000430982 SPTBN4Q9H254 2564 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 LINC01565O15544 149 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 MGEA5O60502 916 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 ZXDAP98168 799 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 FBXL6Q8N531 539 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 SMRP1Q8NCR6 262 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 ZNF689Q96CS4 500 aaPredicted RBP16.88■□□□□ 0.29
PTCD1-204ENST00000430982 ADAM2Q99965 735 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 INO80BQ9C086 356 aaPredicted RBP16.88■□□□□ 0.29
PTCD1-204ENST00000430982 POLR3FQ9H1D9 316 aaPredicted RBP16.88■□□□□ 0.29
PTCD1-204ENST00000430982 PLXNA3P51805 1871 aa16.88■□□□□ 0.29
PTCD1-204ENST00000430982 ASAP2O43150 1006 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 SFPQP23246 707 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTCD1-204ENST00000430982 PADI6Q6TGC4 694 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 SUGP1Q8IWZ8 645 aaKnown RBP16.87■□□□□ 0.29
PTCD1-204ENST00000430982 RNF149Q8NC42 400 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 ASAP3Q8TDY4 903 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 PLIN2Q99541 437 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 MMTAG2Q9BU76 263 aaKnown RBP16.87■□□□□ 0.29
PTCD1-204ENST00000430982 PLVAPQ9BX97 442 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 GPRC5CQ9NQ84 441 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 C1orf112Q9NSG2 853 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 CLEC1BQ9P126 229 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 LRFN2Q9ULH4 789 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 DNM3Q9UQ16 869 aa16.87■□□□□ 0.29
PTCD1-204ENST00000430982 TTC3P53804 2025 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 DMDP11532 3685 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms