RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RNF216Q9NWF9 866 aaPredicted RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 ZNFX1Q9P2E3 1918 aaKnown RBP15.18■□□□□ 0.02
HOXC4-202ENST00000430889 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
HOXC4-202ENST00000430889 SLC16A4O15374 487 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 N4BP1O75113 896 aaKnown RBP15.18■□□□□ 0.02
HOXC4-202ENST00000430889 STAM2O75886 525 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 VAMP7P51809 220 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 PEX3P56589 373 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 PLS1Q14651 629 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 XKR9Q5GH70 373 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 POTEHQ6S545 545 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 MAP4K3Q8IVH8 894 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 XXYLT1Q8NBI6 393 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 TPCN2Q8NHX9 752 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 SPIRE2Q8WWL2 714 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 BSNDQ8WZ55 320 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 IWS1Q96ST2 819 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 PSMB7Q99436 277 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 TELO2Q9Y4R8 837 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 PFASO15067 1338 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 EMSYQ7Z589 1322 aa15.18■□□□□ 0.02
HOXC4-202ENST00000430889 SPATA31C2B4DYI2 1134 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 ADRB2P07550 413 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 KRT13P13646 458 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 TNFRSF8P28908 595 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 ADSSP30520 456 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 NPTX2P47972 431 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 VPS36Q86VN1 386 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 DNAAF5Q86Y56 855 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 FMNL3Q8IVF7 1028 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 AENQ8WTP8 325 aaKnown RBP15.17■□□□□ 0.02
HOXC4-202ENST00000430889 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 KCNN1Q92952 543 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 LRRC1Q9BTT6 524 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 RBM12Q9NTZ6 932 aaKnown RBP15.17■□□□□ 0.02
HOXC4-202ENST00000430889 DMGDHQ9UI17 866 aaKnown RBP15.17■□□□□ 0.02
HOXC4-202ENST00000430889 TMEM59LQ9UK28 342 aa15.17■□□□□ 0.02
HOXC4-202ENST00000430889 KIF4AO95239 1232 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 LMNB1P20700 586 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 PAFAH1B1P43034 410 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 AARSP49588 968 aaKnown RBP eCLIP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 RTP1P59025 263 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 R3HDM1Q15032 1099 aaKnown RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 CFAP221Q4G0U5 840 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 SLC39A4Q6P5W5 647 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 ABHD15Q6UXT9 468 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 GPC2Q8N158 579 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 RDH13Q8NBN7 331 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 FBXL18Q96ME1 805 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 C17orf75Q9HAS0 396 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 XPNPEP1Q9NQW7 623 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 TBX20Q9UMR3 447 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 SNCAIPQ9Y6H5 919 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 IGSF9BQ9UPX0 1349 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 ANKRD63C9JTQ0 380 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 ENPEPQ07075 957 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 IFI16Q16666 785 aaKnown RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 GLE1Q53GS7 698 aaKnown RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 FAM102BQ5T8I3 360 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 ARHGEF19Q8IW93 802 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 U2AF1L4Q8WU68 220 aaKnown RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 KIFAP3Q92845 792 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 ATP6V0A1Q93050 837 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 CDHR1Q96JP9 859 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 GABBR1Q9UBS5 961 aa15.16■□□□□ 0.02
HOXC4-202ENST00000430889 PACSIN2Q9UNF0 486 aaPredicted RBP15.16■□□□□ 0.02
HOXC4-202ENST00000430889 FOXN3O00409 490 aaPredicted RBP15.15■□□□□ 0.02
HOXC4-202ENST00000430889 ZMYND10O75800 440 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 ICAM3P32942 547 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 GALCP54803 685 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 CCDC181Q5TID7 509 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.15■□□□□ 0.02
HOXC4-202ENST00000430889 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 CCDC60Q8IWA6 550 aaPredicted RBP15.15■□□□□ 0.02
HOXC4-202ENST00000430889 CCDC43Q96MW1 224 aaKnown RBP15.15■□□□□ 0.02
HOXC4-202ENST00000430889 TMEM117Q9H0C3 514 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 JPH1Q9HDC5 661 aaPredicted RBP15.15■□□□□ 0.02
HOXC4-202ENST00000430889 ZCCHC17Q9NP64 241 aaKnown RBP15.15■□□□□ 0.02
HOXC4-202ENST00000430889 HOXC10Q9NYD6 342 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 SLC9A2Q9UBY0 812 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 TCEAL9Q9UHQ7 104 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 COQ4Q9Y3A0 265 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 ADGRA3Q8IWK6 1321 aa15.15■□□□□ 0.02
HOXC4-202ENST00000430889 DKC1O60832 514 aaKnown RBP eCLIP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms