RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 KMT5AQ9NQR1 393 aa15.23■□□□□ 0.03
APOBEC3D-202ENST00000427494 TBX20Q9UMR3 447 aa15.23■□□□□ 0.03
APOBEC3D-202ENST00000427494 DAAM1Q9Y4D1 1078 aa15.23■□□□□ 0.03
APOBEC3D-202ENST00000427494 PEX10O60683 326 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 FTCDO95954 541 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 CNTN2Q02246 1040 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 STXBP2Q15833 593 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 CCDC181Q5TID7 509 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 ABHD15Q6UXT9 468 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 BSNDQ8WZ55 320 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 FUT8Q9BYC5 575 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 ABCB6Q9NP58 842 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 DENND3A2RUS2 1198 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 GOLGA8IPA6NC78 632 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 GOLGA8JA6NMD2 632 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 MAPK13O15264 365 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 SUPT20HL2P0C7V6 817 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 CETN1Q12798 172 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 BEND6Q5SZJ8 279 aaPredicted RBP15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 WDR93Q6P2C0 686 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 LBX2Q6XYB7 198 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 ZNF572Q7Z3I7 529 aaPredicted RBP15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 DNAAF5Q86Y56 855 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 MAP4K3Q8IVH8 894 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 BTBD7Q9P203 1132 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 NENFQ9UMX5 172 aa15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 MYH9P35579 1960 aaKnown RBP15.22■□□□□ 0.03
APOBEC3D-202ENST00000427494 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 ANKRD63C9JTQ0 380 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 DGAT1O75907 488 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 RFX1P22670 979 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 GCLMP48507 274 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 SP2Q02086 613 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 PHLDB3Q6NSJ2 640 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 MCPH1Q8NEM0 835 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 LMO3Q8TAP4 145 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 SPIRE2Q8WWL2 714 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 ELP3Q9H9T3 547 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 ATP6V0A4Q9HBG4 840 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
APOBEC3D-202ENST00000427494 PFASO15067 1338 aa15.21■□□□□ 0.02
APOBEC3D-202ENST00000427494 IGSF9BQ9UPX0 1349 aa15.21■□□□□ 0.02
APOBEC3D-202ENST00000427494 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 TULP1O00294 542 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 P4HA2O15460 535 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 EIF3JO75822 258 aaKnown RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 ADRB2P07550 413 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 CCDC172P0C7W6 258 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 MCM3P25205 808 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 ADSSP30520 456 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 PAFAH1B1P43034 410 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 NOP2P46087 812 aaKnown RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 IREB2P48200 963 aaKnown RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 ALDH5A1P51649 535 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 FSTL1Q12841 308 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 C1orf220Q5T0J3 134 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 MEI1Q5TIA1 1274 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 SEPT14Q6ZU15 432 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 CYFIP1Q7L576 1253 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 LNX1Q8TBB1 728 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 FHDC1Q9C0D6 1143 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 C17orf75Q9HAS0 396 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 ST7Q9NRC1 585 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 SMARCAL1Q9NZC9 954 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 EHD2Q9NZN4 543 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 FBXO40Q9UH90 709 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 H2AFZP0C0S5 128 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 MXI1P50539 228 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 DNA2P51530 1060 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 ITIH3Q06033 890 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 IFI16Q16666 785 aaKnown RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 MTERF2Q49AM1 385 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 EPC2Q52LR7 807 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 H2AFVQ71UI9 128 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 CBWD2Q8IUF1 395 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 RIOX2Q8IUF8 465 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 SPATA4Q8NEY3 305 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 UPF1Q92900 1129 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■■■■■ 29
APOBEC3D-202ENST00000427494 POLR3FQ9H1D9 316 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 SPON1Q9HCB6 807 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 UBE2TQ9NPD8 197 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 XPNPEP1Q9NQW7 623 aa15.2■□□□□ 0.02
APOBEC3D-202ENST00000427494 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms