RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 FAM186BQ8IYM0 893 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 ACRBPQ8NEB7 543 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 PLAGL2Q9UPG8 496 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 PES1O00541 588 aaKnown RBP14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 GLRA2P23416 452 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 NCBP1Q09161 790 aaKnown RBP14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 SREBF2Q12772 1141 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 TAF1CQ15572 869 aaPredicted RBP14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 OLFML2BQ68BL8 750 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 CCDC155Q8N6L0 562 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 SYN2Q92777 582 aaPredicted RBP14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 GANQ9H2C0 597 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 DNAI1Q9UI46 699 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 USP20Q9Y2K6 914 aa14.65□□□□□ -0.06
TMEM50B-201ENST00000420455 CCDC175P0C221 793 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 TRIM21P19474 475 aaKnown RBP14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 DUSP28Q4G0W2 176 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 BRDTQ58F21 947 aaPredicted RBP14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 DPP9Q86TI2 863 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 ASAP3Q8TDY4 903 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 TMEM134Q9H6X4 195 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 CEP72Q9P209 647 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 GJD2Q9UKL4 321 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 DENND3A2RUS2 1198 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 TUBB4AP04350 444 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 SLC7A3Q8WY07 619 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 IFT74Q96LB3 600 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 ZNF215Q9UL58 517 aaPredicted RBP14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 FRMD4BQ9Y2L6 1034 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 NOP56O00567 594 aaKnown RBP14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 ARHGAP25P42331 645 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 ACVR2BQ13705 512 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 CDCA2Q69YH5 1023 aaPredicted RBP14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 SYCP3Q8IZU3 236 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 LINC01465Q8N7H1 131 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 HSPBP1Q9NZL4 362 aa14.64□□□□□ -0.07
TMEM50B-201ENST00000420455 ANKRD63C9JTQ0 380 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 HBP1O60381 514 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 GARTP22102 1010 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 ANKRD7Q92527 254 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 CBWD1Q9BRT8 395 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 SIX2Q9NPC8 291 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 DAAM1Q9Y4D1 1078 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 COL1A2P08123 1366 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 GOLGA6L9A6NEM1 432 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 SMPD1P17405 629 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 CNGA1P29973 690 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 ADCYAP1R1P41586 468 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 BFSP1Q12934 665 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 C1orf220Q5T0J3 134 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 IER5Q5VY09 327 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 XXYLT1Q8NBI6 393 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 ZNF397Q8NF99 534 aaPredicted RBP14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 C16orf70Q9BSU1 422 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 KIFC3Q9BVG8 833 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 ZFYVE28Q9HCC9 887 aa14.63□□□□□ -0.07
TMEM50B-201ENST00000420455 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 CCDC169A6NNP5 214 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 TISP43B9A030 160 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 ZNF662Q6ZS27 426 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 INTS8Q75QN2 995 aaKnown RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 TMEM143Q96AN5 459 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 CCDC113Q9H0I3 377 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 NUCKS1Q9H1E3 243 aaKnown RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 LZTFL1Q9NQ48 299 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 ERAP1Q9NZ08 941 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 MYO6Q9UM54 1294 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 PPFIA4O75335 1185 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 LGALS2P05162 132 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 PON1P27169 355 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 PDXDC1Q6P996 788 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 TRIM50Q86XT4 487 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 NEK11Q8NG66 645 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 FLRT1Q9NZU1 646 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 P4HA2O15460 535 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 LCA5LO95447 670 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 ZNF865P0CJ78 1059 aaPredicted RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 CYP2J2P51589 502 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 ZNF484Q5JVG2 852 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 TRMT1LQ7Z2T5 733 aaKnown RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 CCDC170Q8IYT3 715 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 TCP11Q8WWU5 503 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 GLG1Q92896 1179 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 MFSD14AQ96MC6 490 aa14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 JPH2Q9BR39 696 aaPredicted RBP14.62□□□□□ -0.07
TMEM50B-201ENST00000420455 KIAA0391O15091 583 aaKnown RBP14.61□□□□□ -0.07
TMEM50B-201ENST00000420455 ADCY6O43306 1168 aa14.61□□□□□ -0.07
TMEM50B-201ENST00000420455 CA12O43570 354 aa14.61□□□□□ -0.07
TMEM50B-201ENST00000420455 NDUFA10O95299 355 aa14.61□□□□□ -0.07
TMEM50B-201ENST00000420455 FMO5P49326 533 aa14.61□□□□□ -0.07
TMEM50B-201ENST00000420455 CAPSQ13938 189 aa14.61□□□□□ -0.07
TMEM50B-201ENST00000420455 SOCS4Q8WXH5 440 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms