RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CTNND2Q9UQB3 1225 aa7.15□□□□□ -1.26
NIFKP3-201ENST00000417799 COA3Q9Y2R0 106 aaPredicted RBP7.15□□□□□ -1.26
NIFKP3-201ENST00000417799 X6R8D5 127 aa7.15□□□□□ -1.26
NIFKP3-201ENST00000417799 QSER1Q2KHR3 1735 aa7.15□□□□□ -1.27
NIFKP3-201ENST00000417799 A0A1W2PQJ5 194 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 CCDC66A2RUB6 948 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 M0R2C6 588 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 GLRX3O76003 335 aaKnown RBP7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 HMGB1P09429 215 aaKnown RBP7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 RFX5P48382 616 aaPredicted RBP7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 CYP4F8P98187 520 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 NFKB2Q00653 900 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 SF3B3Q15393 1217 aaKnown RBP7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 CCDC57Q2TAC2 916 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 CCDC152Q4G0S7 254 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 SMC5Q8IY18 1101 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 GCC1Q96CN9 775 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 DCTPP1Q9H773 170 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 CATSPERZQ9NTU4 200 aa7.14□□□□□ -1.27
NIFKP3-201ENST00000417799 COL24A1Q17RW2 1714 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 RIC1Q4ADV7 1423 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 ABCC12Q96J65 1359 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 ANKRD18BA2A2Z9 1011 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 KLRG2A4D1S0 409 aaPredicted RBP7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 SURF6O75683 361 aaKnown RBP7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 ZBTB7AO95365 584 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 EFEMP2O95967 443 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 IFIT5Q13325 482 aaKnown RBP7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 SNX17Q15036 470 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 SEPT7Q16181 437 aaKnown RBP7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 CRY1Q16526 586 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 TMEM177Q53S58 311 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 HSP90AB4PQ58FF6 505 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 MROH9Q5TGP6 573 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 NLRX1Q86UT6 975 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 KLHDC4Q8TBB5 520 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 ORAI3Q9BRQ5 295 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 BRIP1Q9BX63 1249 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 FAM126AQ9BYI3 521 aaPredicted RBP7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 EPB41L1Q9H4G0 881 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 GREM2Q9H772 168 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 FBLN5Q9UBX5 448 aa7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 PA2G4Q9UQ80 394 aaKnown RBP7.13□□□□□ -1.27
NIFKP3-201ENST00000417799 RTL9Q8NET4 1388 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 CBX4O00257 560 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 RAB11FIP3O75154 756 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 DGKIO75912 1065 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 GNAT1P11488 350 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 POU3F3P20264 500 aaPredicted RBP7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 POLD1P28340 1107 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 SPIRE1Q08AE8 756 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 G3BP1Q13283 466 aaKnown RBP eCLIP7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 CRY2Q49AN0 593 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 BICRALQ6AI39 1079 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 OVCH1Q7RTY7 1134 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 STRA8Q7Z7C7 330 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 RIOX2Q8IUF8 465 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 ABI1Q8IZP0 508 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 AFAP1L2Q8N4X5 818 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 CBLCQ9ULV8 474 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 EXOC6BQ9Y2D4 811 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 ATP8A1Q9Y2Q0 1164 aa7.12□□□□□ -1.27
NIFKP3-201ENST00000417799 EYA2O00167 538 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CIAO1O76071 339 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 NTRK1P04629 796 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 COL6A2P12110 1019 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 PNLIPP16233 465 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CPEP16870 476 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 PDE6BP35913 854 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 ARL4AP40617 200 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 IL15P40933 162 aaPredicted RBP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 AFMP43652 599 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 SCNN1BP51168 640 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 GALK1P51570 392 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 GP2P55259 537 aaKnown RBP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 NUCB1Q02818 461 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 STRN3Q13033 797 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 OS9Q13438 667 aaPredicted RBP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 DHCR24Q15392 516 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 ARTNQ5T4W7 220 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 ANKRD45Q5TZF3 282 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 OTOP3Q7RTS5 596 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 ATG9AQ7Z3C6 839 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CABP7Q86V35 215 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 KIF18BQ86Y91 864 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 ERC1Q8IUD2 1116 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CISD2Q8N5K1 135 aaKnown RBP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 OR2W6PQ8NHA6 318 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 ABHD4Q8TB40 342 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 RBM17Q96I25 401 aaKnown RBP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CDC5LQ99459 802 aaKnown RBP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 SIL1Q9H173 461 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CRTAC1Q9NQ79 661 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms