RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 TRIB2Q92519 343 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 UHRF1Q96T88 793 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 EPB41L4BQ9H329 900 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 DDX56Q9NY93 547 aaKnown RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 ZNF112Q9UJU3 913 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 TMEM59LQ9UK28 342 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 CACNA1AO00555 2505 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 ZDBF2Q9HCK1 2354 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 RLFQ13129 1914 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 COL2A1P02458 1487 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 DNAJC25-GNG10A0A024R161 153 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 ESR1P03372 595 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 ACRP10323 421 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 RAG1P15918 1043 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 CNGA1P29973 690 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 CCND3P30281 292 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 ETV3P41162 512 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 GCLCP48506 637 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 YARSP54577 528 aaKnown RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 RTP1P59025 263 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 SMAD3P84022 425 aaKnown RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 AMPD3Q01432 767 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 SLC7A5Q01650 507 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 CALD1Q05682 793 aaKnown RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 ZYXQ15942 572 aaKnown RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 RALGPS1Q5JS13 557 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 TREML2Q5T2D2 321 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 G2E3Q7L622 706 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 MRPL41Q8IXM3 137 aaKnown RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 NINJ1Q92982 152 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 SLC9A7Q96T83 725 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 KIF2CQ99661 725 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 KANSL2Q9H9L4 492 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 USP40Q9NVE5 1235 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 ZNF214Q9UL59 606 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-210ENST00000415055 AGTPBP1Q9UPW5 1226 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 SLC45A1Q9Y2W3 748 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 AFG3L2Q9Y4W6 797 aa5.59□□□□□ -1.51
PTPRK-210ENST00000415055 PRRC2BQ5JSZ5 2229 aaKnown RBP5.59□□□□□ -1.52
PTPRK-210ENST00000415055 LOC285556D6RIA3 1793 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 NPIPB6E9PJ23 425 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 ASMTLO95671 621 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 HPXP02790 462 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 COL6A1P12109 1028 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 HK2P52789 917 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 HMGCS2P54868 508 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 IRX3P78415 501 aaPredicted RBP5.58□□□□□ -1.52
PTPRK-210ENST00000415055 FOXO4P98177 505 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 FNDC3BQ53EP0 1204 aaKnown RBP5.58□□□□□ -1.52
PTPRK-210ENST00000415055 METTL24Q5JXM2 366 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 WDR78Q5VTH9 848 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 SLC6A19Q695T7 634 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 CDC42EP5Q6NZY7 148 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 LILRA6Q6PI73 481 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 HHIPL2Q6UWX4 724 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 SPATC1Q76KD6 591 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
PTPRK-210ENST00000415055 TSPYL6Q8N831 410 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 DNAAF4Q8WXU2 420 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 BADQ92934 168 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 MFSD3Q96ES6 412 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 IPO9Q96P70 1041 aaKnown RBP5.58□□□□□ -1.52
PTPRK-210ENST00000415055 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
PTPRK-210ENST00000415055 CD320Q9NPF0 282 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 FAM86C1Q9NVL1 165 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 THEGQ9P2T0 379 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 GJD2Q9UKL4 321 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 PCDHB10Q9UN67 800 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 ZNFX1Q9P2E3 1918 aaKnown RBP5.58□□□□□ -1.52
PTPRK-210ENST00000415055 GBF1Q92538 1859 aa5.58□□□□□ -1.52
PTPRK-210ENST00000415055 TCAF2A6NFQ2 919 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 SUSD5O60279 629 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 PEX10O60683 326 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 ZNF853P0CG23 659 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 MED14OSP0DP75 135 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 PMLP29590 882 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 RGS2P41220 211 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 RGS3P49796 1198 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 ERVFC1P60507 584 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 MRPS5P82675 430 aaKnown RBP5.57□□□□□ -1.52
PTPRK-210ENST00000415055 SPP2Q13103 211 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 PICALMQ13492 652 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 KCNA10Q16322 511 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 CCL14Q16627 93 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 TM4SF20Q53R12 229 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 EPHA10Q5JZY3 1008 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 MAP3K21Q5TCX8 1036 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 ATG14Q6ZNE5 492 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 CCDC129Q6ZRS4 1044 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 CREG2Q8IUH2 290 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 ZFPM1Q8IX07 1006 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 LINS1Q8NG48 757 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 BAHD1Q8TBE0 780 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms