RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 EDC3Q96F86 508 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ACAD9Q9H845 621 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 KRT7P08729 469 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 CASP14P31944 242 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ICA1LQ8NDH6 482 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 PGBD4Q96DM1 585 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 PLEKHA4Q9H4M7 779 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 KLHL8Q9P2G9 620 aaPredicted RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 STOML1Q9UBI4 398 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 STK36Q9NRP7 1315 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 PEX3P56589 373 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 NHEJ1Q9H9Q4 299 aaPredicted RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 MTMR6Q9Y217 621 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 E5RI56 91 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ABCE1P61221 599 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 FAM133BQ5BKY9 247 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 RNF181Q9P0P0 153 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 PSMD3O43242 534 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 CHGBP05060 677 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 SKIV2LQ15477 1246 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 ULK4Q96C45 1275 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
SCN5A-204ENST00000414099 PCIF1Q9H4Z3 704 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 DIABLOQ9NR28 239 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 RFX7Q2KHR2 1363 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 POLE2P56282 527 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 DACH2Q96NX9 599 aa11.31□□□□□ -0.6
SCN5A-204ENST00000414099 CFLARO15519 480 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 GFPT2O94808 682 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CD58P19256 250 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 OSTNP61366 133 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PRDM15P57071 1507 aaPredicted RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CLIC2O15247 247 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 RBL2Q08999 1139 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 MOSPD1Q9UJG1 213 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PIK3R2O00459 728 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 NR5A1Q13285 461 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 RARS2Q5T160 578 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 MEI1Q5TIA1 1274 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 NAA35Q5VZE5 725 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 KCTD16Q68DU8 428 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 SP110Q9HB58 689 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 KCNQ3O43525 872 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 EFNA5P52803 228 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 ABCC3O15438 1527 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 TNS3Q68CZ2 1445 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 H0Y626 953 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 GOLGA8RI6L899 631 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 COBLO75128 1261 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 TRIM16O95361 564 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 ATICP31939 592 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PIGBQ92521 554 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PITPNM3Q9BZ71 974 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 PYGMP11217 842 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CCNE1P24864 410 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CARSP49589 748 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 TMPRSS15P98073 1019 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 UHMK1Q8TAS1 419 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 HSPH1Q92598 858 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 DTNBP1Q96EV8 351 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CLIC6Q96NY7 704 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 GRID2IPA4D2P6 1211 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 SCP2P22307 547 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms