RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SYCE3A1L190 88 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 SLC37A4O43826 429 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 TXLNAP40222 546 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 GPC3P51654 580 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 CALCRLQ16602 461 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 SPOUT1Q5T280 376 aaKnown RBP18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 EP400NLQ6ZTU2 488 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 NEK9Q8TD19 979 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 NLRP7Q8WX94 980 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 NECAB3Q96P71 396 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 RAB34Q9BZG1 259 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 ADAMTS10Q9H324 1103 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 USP25Q9UHP3 1055 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 PPME1Q9Y570 386 aa18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 MYH9P35579 1960 aaKnown RBP18.8■□□□□ 0.6
SCAMP4-204ENST00000414057 REV3LO60673 3130 aa18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 TBKBP1A7MCY6 615 aa18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 QARSP47897 775 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 FAM189BP81408 668 aa18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 MTMR9Q96QG7 549 aa18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 GCOM2Q9BZD3 368 aaPredicted RBP18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 INO80BQ9C086 356 aaPredicted RBP18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 ALG13Q9NP73 1137 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 CLDND1Q9NY35 253 aa18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 HOOK1Q9UJC3 728 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-204ENST00000414057 P4HBP07237 508 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 DARSP14868 501 aaKnown RBP18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 UBE3AQ05086 875 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 GRIN1Q05586 938 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 DSC3Q14574 896 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 COL19A1Q14993 1142 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 KANK3Q6NY19 840 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 ABI1Q8IZP0 508 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 KLHL23Q8NBE8 558 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 NLRC5Q86WI3 1866 aa18.78■□□□□ 0.6
SCAMP4-204ENST00000414057 IGKV6-21A0A0C4DH24 114 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 MAFO75444 373 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 FXR2P51116 673 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 PDIA5Q14554 519 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 FAM102BQ5T8I3 360 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 PTCRAQ6ISU1 281 aaPredicted RBP18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 ZNF410Q86VK4 478 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 C1QTNF1Q9BXJ1 281 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 TMEM117Q9H0C3 514 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 CHST12Q9NRB3 414 aa18.77■□□□□ 0.6
SCAMP4-204ENST00000414057 MUC3AQ02505 3323 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 STBD1O95210 358 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 ITGB1P05556 798 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 GATMP50440 423 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 EPHA7Q15375 998 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 IL17AQ16552 155 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 OTUD6AQ7L8S5 288 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 POF1BQ8WVV4 589 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 SLC7A3Q8WY07 619 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 SUCLA2Q9P2R7 463 aaPredicted RBP18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 VAV3Q9UKW4 847 aa18.77■□□□□ 0.59
SCAMP4-204ENST00000414057 GOLGA6L3A6NEY3 463 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 GRXCR2A6NFK2 248 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 H3BQ06 376 aaPredicted RBP18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 EOMESO95936 686 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 CCDC192P0DO97 292 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 LAG3P18627 525 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 CAMK4Q16566 473 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 KRBA2Q6ZNG9 492 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 ANO5Q75V66 913 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 IGSF22Q8N9C0 903 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 RSPH1Q8WYR4 309 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 CCSER1Q9C0I3 900 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 CYP26B1Q9NR63 512 aa18.76■□□□□ 0.59
SCAMP4-204ENST00000414057 A0A0U1RQF3 1178 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 FSD2A1L4K1 749 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 EML1O00423 815 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 SLC26A4O43511 780 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 SKIP12755 728 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 HYAL1Q12794 435 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 CTC1Q2NKJ3 1217 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 SPECC1Q5M775 1068 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 PDE12Q6L8Q7 609 aaKnown RBP18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 ECHDC2Q86YB7 292 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 RHPN2Q8IUC4 686 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 FAM178BQ8IXR5 827 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 C4orf19Q8IY42 314 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 CNNM3Q8NE01 707 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 HAS1Q92839 578 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 EPSTI1Q96J88 318 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 ZNF668Q96K58 619 aaPredicted RBP18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 CEP170P1Q96L14 293 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 CEP89Q96ST8 783 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 TSPY26PQ9H489 355 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 ZSWIM4Q9H7M6 989 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 TYW1Q9NV66 732 aaKnown RBP18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 TTC28Q96AY4 2481 aa18.75■□□□□ 0.59
SCAMP4-204ENST00000414057 TCF20Q9UGU0 1960 aaKnown RBP18.74■□□□□ 0.59
SCAMP4-204ENST00000414057 EVPLQ92817 2033 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms