RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TRIM22Q8IYM9 498 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 PGBD4Q96DM1 585 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 JPH2Q9BR39 696 aaPredicted RBP18.77■□□□□ 0.6
MRPL55-220ENST00000411464 AGXT2Q9BYV1 514 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 MFSD1Q9H3U5 465 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 NRDE2Q9H7Z3 1164 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 NCOA5Q9HCD5 579 aaKnown RBP18.77■□□□□ 0.6
MRPL55-220ENST00000411464 FAM105AQ9NUU6 356 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 TBC1D13Q9NVG8 400 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 USTQ9Y2C2 406 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 EVPLQ92817 2033 aa18.77■□□□□ 0.6
MRPL55-220ENST00000411464 CYP3A7-CYP3A51PA0A087WV96 503 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 ZNF623O75123 536 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 MAFO75444 373 aaPredicted RBP18.76■□□□□ 0.59
MRPL55-220ENST00000411464 STBD1O95210 358 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 ASGR2P07307 311 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 EPCAMP16422 314 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 CYP3A7P24462 503 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 PDIA3P30101 505 aaKnown RBP18.76■□□□□ 0.59
MRPL55-220ENST00000411464 KANK3Q6NY19 840 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 SLC22A17Q8WUG5 538 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 NLRP4Q96MN2 994 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 CEP89Q96ST8 783 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 STK39Q9UEW8 545 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 PCDHA4Q9UN74 947 aa18.76■□□□□ 0.59
MRPL55-220ENST00000411464 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 OFD1O75665 1012 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 TDP2O95551 362 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 PSMC5P62195 406 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 SSRP1Q08945 709 aaKnown RBP18.75■□□□□ 0.59
MRPL55-220ENST00000411464 TMC5Q6UXY8 1006 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 URGCPQ8TCY9 931 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 ACSF2Q96CM8 615 aaPredicted RBP18.75■□□□□ 0.59
MRPL55-220ENST00000411464 CYP26B1Q9NR63 512 aa18.75■□□□□ 0.59
MRPL55-220ENST00000411464 MEIS3P2A8K0S8 358 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 EVCP57679 992 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 ASTLQ6HA08 431 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-220ENST00000411464 B3GNT9Q6UX72 402 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 ANO5Q75V66 913 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 KSR1Q8IVT5 923 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 TMEM105Q8N8V8 129 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 BCL7CQ8WUZ0 217 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-220ENST00000411464 EMILIN2Q9BXX0 1053 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 SMOC2Q9H3U7 446 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 DNAJB4Q9UDY4 337 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 PCDHB2Q9Y5E7 798 aa18.74■□□□□ 0.59
MRPL55-220ENST00000411464 ZFHX2Q9C0A1 2572 aaPredicted RBP18.74■□□□□ 0.59
MRPL55-220ENST00000411464 CPLX1O14810 134 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 ALDH2P05091 517 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 KLRC2P26717 231 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 SLC11A1P49279 550 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 MOXD1Q6UVY6 613 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 ZNF280BQ86YH2 543 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 ETNPPLQ8TBG4 499 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 SLC7A3Q8WY07 619 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 FAM193BQ96PV7 902 aaPredicted RBP18.73■□□□□ 0.59
MRPL55-220ENST00000411464 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
MRPL55-220ENST00000411464 SFXN1Q9H9B4 322 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 AGPAT5Q9NUQ2 364 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 KANSL3Q9P2N6 904 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 USP34Q70CQ2 3546 aa18.73■□□□□ 0.59
MRPL55-220ENST00000411464 PROB1E7EW31 1015 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 DKC1O60832 514 aaKnown RBP eCLIP18.72■□□□□ 0.59
MRPL55-220ENST00000411464 DEXIO95424 95 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 CLCN5P51795 746 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 NONOQ15233 471 aaKnown RBP eCLIP18.72■□□□□ 0.59
MRPL55-220ENST00000411464 PTPN14Q15678 1187 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 PLA2G4FQ68DD2 849 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 OTOP3Q7RTS5 596 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 GPR149Q86SP6 731 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 SNX27Q96L92 541 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 MBOAT7Q96N66 472 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 IFT122Q9HBG6 1241 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 DDX25Q9UHL0 483 aaKnown RBP18.72■□□□□ 0.59
MRPL55-220ENST00000411464 FAN1Q9Y2M0 1017 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 COL4A3BPQ9Y5P4 624 aa18.72■□□□□ 0.59
MRPL55-220ENST00000411464 REC8O95072 547 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 SSBP05455 408 aaKnown RBP eCLIP18.71■□□□□ 0.59
MRPL55-220ENST00000411464 SRGAP2CP0DJJ0 459 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
MRPL55-220ENST00000411464 AGMOQ6ZNB7 445 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 CCDC149Q6ZUS6 474 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 FAM177A1Q8N128 213 aaPredicted RBP18.71■□□□□ 0.59
MRPL55-220ENST00000411464 CEP170P1Q96L14 293 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 KLHL5Q96PQ7 755 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 VN1R3Q9BXE9 311 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 RSAD1Q9HA92 442 aa18.71■□□□□ 0.59
MRPL55-220ENST00000411464 MRPL17Q9NRX2 175 aaKnown RBP18.71■□□□□ 0.59
MRPL55-220ENST00000411464 MYH9P35579 1960 aaKnown RBP18.71■□□□□ 0.59
MRPL55-220ENST00000411464 M0R2N6 131 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 EML1O00423 815 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 DDHD2O94830 711 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 CNPP09543 421 aaKnown RBP18.7■□□□□ 0.58
MRPL55-220ENST00000411464 CLCN4P51793 760 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 NPEPPSP55786 919 aa18.7■□□□□ 0.58
MRPL55-220ENST00000411464 TDGQ13569 410 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms