RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SEMA3FQ13275 785 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 MTM1Q13496 603 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 FASTKD1Q53R41 847 aaKnown RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 LVRNQ6Q4G3 990 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 FOXP4Q8IVH2 680 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ACAP3Q96P50 834 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ZC4H2Q9NQZ6 224 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 DBNLQ9UJU6 430 aaKnown RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 IFT88Q13099 833 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ARHGEF7Q14155 803 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 SAMD7Q7Z3H4 446 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 P2RX5Q93086 422 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ADA2Q9NZK5 511 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 SUN2Q9UH99 717 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 MKL2Q9ULH7 1088 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PCDHB6Q9Y5E3 794 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PQBP1O60828 265 aaKnown RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 GNA15P30679 374 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 CARMIL3Q8ND23 1372 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 KRT87PA6NCN2 255 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ZNF263O14978 683 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 MEFVO15553 781 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 DIAPH2O60879 1101 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 RPS6KA5O75582 802 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 E2F5Q15329 346 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 POTEDQ86YR6 584 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 CCDC33Q8N5R6 958 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PABPC5Q96DU9 382 aaKnown RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 FGFR1OP2Q9NVK5 253 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ABCA10Q8WWZ4 1543 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 A0A0G2JND7 137 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 CHL1O00533 1208 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 CHRNA3P32297 505 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 KRT17Q04695 432 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 BTKQ06187 659 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 TMED1Q13445 227 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 TDRD7Q8NHU6 1098 aaKnown RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 MAGED4Q96JG8 741 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 PIH1D3Q9NQM4 214 aaKnown RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 ADAM22Q9P0K1 906 aa8.95□□□□□ -0.98
SCN9A-203ENST00000409672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.95□□□□□ -0.98
SCN9A-203ENST00000409672 BCAR1P56945 870 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 GALNT17Q6IS24 598 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 ADGRF4Q8IZF3 695 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 SNX31Q8N9S9 440 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 MAN1B1Q9UKM7 699 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 RPRD2Q5VT52 1461 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 HIP1RO75146 1068 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PGBD4Q96DM1 585 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 RUBCNLQ9H714 662 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 ACOT2P49753 483 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 FAM136AQ96C01 138 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 RASSF4Q9H2L5 321 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 SEL1LQ9UBV2 794 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PRG3Q9Y2Y8 225 aaPredicted RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 ATP10DQ9P241 1426 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 EIF3CLB5ME19 914 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 ALDH7A1P49419 539 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PKP1Q13835 747 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 NAF1Q96HR8 494 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 EIF3CQ99613 913 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 TEX12Q9BXU0 123 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 MRPL4Q9BYD3 311 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 LSM7Q9UK45 103 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 N6AMT1Q9Y5N5 214 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 ATP10AO60312 1499 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 POTEB3A0JP26 581 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 POTECB2RU33 542 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 UBE2Q2LH0YL09 131 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 TMPRSS15P98073 1019 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 TNFAIP2Q03169 654 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 POTEBQ6S5H4 581 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 CAPS2Q9BXY5 557 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 ZNF212Q9UDV6 495 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 DCTN3O75935 186 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PRELPP51888 382 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 RBM6P78332 1123 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 RAD51Q06609 339 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 EZH2Q15910 746 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 KLC2Q9H0B6 622 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 NRBP1Q9UHY1 535 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 MCM8Q9UJA3 840 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 UGGT2Q9NYU1 1516 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 TJP3O95049 919 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 KCNA2P16389 499 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PMS1P54277 932 aaKnown RBP8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PLIN5Q00G26 463 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 RASGRF1Q13972 1273 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 SLFN12LQ6IEE8 588 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 VN1R5Q7Z5H4 357 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 NUP93Q8N1F7 819 aa8.94□□□□□ -0.98
SCN9A-203ENST00000409672 PRAG1Q86YV5 1406 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 KPNA1P52294 538 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 ZNF211Q13398 564 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 PLCL1Q15111 1095 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 SURF1Q15526 300 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 NSUN6Q8TEA1 469 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 EXOC4Q96A65 974 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 NHEJ1Q9H9Q4 299 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms