RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 DNAJC7Q99615 494 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 PIK3R2O00459 728 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 RALBP11234 206 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SDC4P31431 198 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SNAP25P60880 206 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 TAP1Q03518 808 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 MXD3Q9BW11 206 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 ACAD9Q9H845 621 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 RAVER2Q9HCJ3 691 aaKnown RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SH2B2O14492 632 aaPredicted RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 KDM1AO60341 852 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SPARCL1Q14515 664 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 RMDN1Q96DB5 314 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 MRFAP1L1Q96HT8 127 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 ASAP2O43150 1006 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 HSD17B4P51659 736 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 C2orf54Q08AI8 447 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 IFT88Q13099 833 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SNX17Q15036 470 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 C17orf53Q8N3J3 647 aaPredicted RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 PGBD4Q96DM1 585 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 MAN1B1Q9UKM7 699 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 AP3B1O00203 1094 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SREBF2Q12772 1141 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 TRIM72Q6ZMU5 477 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 XXYLT1Q8NBI6 393 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 PHF21AQ96BD5 680 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 NDEL1Q9GZM8 345 aa12.34□□□□□ -0.43
CCDC144A-206ENST00000399273 M0QYV0 167 aa12.33□□□□□ -0.43
CCDC144A-206ENST00000399273 TMPRSS15P98073 1019 aa12.33□□□□□ -0.43
CCDC144A-206ENST00000399273 LLGL1Q15334 1064 aa12.33□□□□□ -0.43
CCDC144A-206ENST00000399273 KIF12Q96FN5 646 aa12.33□□□□□ -0.43
CCDC144A-206ENST00000399273 TNIP3Q96KP6 325 aa12.33□□□□□ -0.43
CCDC144A-206ENST00000399273 ASMTLO95671 621 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 KRT72Q14CN4 511 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 FAM182BQ5T319 152 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 DBNLQ9UJU6 430 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 PFDN1O60925 122 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ACSL3O95573 720 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 GNA15P30679 374 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 POU5F1BQ06416 359 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 SLC35F6Q8N357 371 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 PPP1R13BQ96KQ4 1090 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ZFP42Q96MM3 310 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ENC1O14682 589 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ZRANB2O95218 330 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 CDK17Q00537 523 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 LAMB3Q13751 1172 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ZNF394Q53GI3 561 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ALS2CLQ60I27 953 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 AIPL1Q9NZN9 384 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ARMC6Q6NXE6 501 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 WDR48Q8TAF3 677 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ASAP3Q8TDY4 903 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 CDC23Q9UJX2 597 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 PCDHB7Q9Y5E2 793 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 GPSM2P81274 684 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 TEDDM1Q5T9Z0 273 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 TBC1D1Q86TI0 1168 aaPredicted RBP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 SCFD1Q8WVM8 642 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 STAT3P40763 770 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 NR1H3Q13133 447 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 GTF3C2Q8WUA4 911 aaPredicted RBP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 DACH2Q96NX9 599 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 SPATA16Q9BXB7 569 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 POLR3FQ9H1D9 316 aaPredicted RBP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 DDX56Q9NY93 547 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 SCOCQ9UIL1 159 aa12.33□□□□□ -0.44
CCDC144A-206ENST00000399273 MAP3K4Q9Y6R4 1608 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 KRT8P05787 483 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 BLVRAP53004 296 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 MDM2Q00987 491 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 SFSWAPQ12872 951 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 SPDYE7PQ495Y7 208 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 PKN3Q6P5Z2 889 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 TMCO5AQ8N6Q1 288 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 ZFYVE28Q9HCC9 887 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 IP6K2Q9UHH9 426 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
CCDC144A-206ENST00000399273 ABCA8O94911 1581 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms