RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 IFNLR1Q8IU57 520 aaPredicted RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 SNX29Q8TEQ0 813 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 PRDM6Q9NQX0 595 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 AGPAT5Q9NUQ2 364 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 PCDHB12Q9Y5F1 795 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 EYSQ5T1H1 3165 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 A0A087WWV3 80 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 ERLIN2O94905 339 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 BMP15O95972 392 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 AXLP30530 894 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 AAK1Q2M2I8 961 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 SKOR2Q2VWA4 1001 aaPredicted RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 RNF169Q8NCN4 708 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 NFKBIZQ9BYH8 718 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 POLR3FQ9H1D9 316 aaPredicted RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 MTMR6Q9Y217 621 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 ZNF623O75123 536 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 CYP11B2P19099 503 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 PADI6Q6TGC4 694 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 ASAP3Q8TDY4 903 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 SYMPKQ92797 1274 aaKnown RBP16.15■□□□□ 0.18
SEC13-208ENST00000397109 CASD1Q96PB1 797 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 MINDY3Q9H8M7 445 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 FAM105AQ9NUU6 356 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 RNF19AQ9NV58 838 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
SEC13-208ENST00000397109 PLAGL2Q9UPG8 496 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 DNM3Q9UQ16 869 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 BRWD1Q9NSI6 2320 aa16.15■□□□□ 0.18
SEC13-208ENST00000397109 VPS37CA5D8V6 355 aaPredicted RBP16.14■□□□□ 0.17
SEC13-208ENST00000397109 INO80B-WBP1J3KQ70 363 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 GRM6O15303 877 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 ATF7P17544 494 aaPredicted RBP16.14■□□□□ 0.17
SEC13-208ENST00000397109 LAG3P18627 525 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 GLRA2P23416 452 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 CAPSQ13938 189 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 IL17AQ16552 155 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 TJAP1Q5JTD0 557 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 LRRC43Q8N309 656 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 KLHL23Q8NBE8 558 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 HLA-CQ95604 372 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
SEC13-208ENST00000397109 MRPL9Q9BYD2 267 aaKnown RBP16.14■□□□□ 0.17
SEC13-208ENST00000397109 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.17
SEC13-208ENST00000397109 CARNS1A5YM72 827 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 UBE3AQ05086 875 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 ECM1Q16610 540 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 CLLU1OSQ5K130 101 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 MAEAQ7L5Y9 396 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 SPPL3Q8TCT6 385 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 BHMT2Q9H2M3 363 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 NSUN3Q9H649 340 aaKnown RBP16.13■□□□□ 0.17
SEC13-208ENST00000397109 CWH43Q9H720 699 aa16.13■□□□□ 0.17
SEC13-208ENST00000397109 EYA4O95677 639 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 BRD1O95696 1058 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 ITGB1P05556 798 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 HOXA11P31270 313 aaPredicted RBP16.12■□□□□ 0.17
SEC13-208ENST00000397109 PPP2R5AQ15172 486 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 NOTUMQ6P988 496 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 GLB1LQ6UWU2 654 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 MRPL10Q7Z7H8 261 aaKnown RBP16.12■□□□□ 0.17
SEC13-208ENST00000397109 ZBTB8OSQ8IWT0 167 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 COLGALT1Q8NBJ5 622 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 HELQQ8TDG4 1101 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 C2orf40Q9H1Z8 148 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 ALG13Q9NP73 1137 aaKnown RBP16.12■□□□□ 0.17
SEC13-208ENST00000397109 GPRC5CQ9NQ84 441 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 PCDHB2Q9Y5E7 798 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 UNC80Q8N2C7 3258 aa16.12■□□□□ 0.17
SEC13-208ENST00000397109 CUL9Q8IWT3 2517 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 VWA3AA6NCI4 1184 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 LRRIQ4A6NIV6 560 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 DLL1O00548 723 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 SLC26A4O43511 780 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 NCK2O43639 380 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 TSPAN1O60635 241 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 CDC25AP30304 524 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 PPM1AP35813 382 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 MBTD1Q05BQ5 628 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 PKP1Q13835 747 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 HYIQ5T013 277 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 THNSL1Q8IYQ7 743 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 KIFAP3Q92845 792 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 IFT74Q96LB3 600 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 AK8Q96MA6 479 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 ZNF558Q96NG5 402 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 MMTAG2Q9BU76 263 aaKnown RBP16.11■□□□□ 0.17
SEC13-208ENST00000397109 NT5C3AQ9H0P0 336 aa16.11■□□□□ 0.17
SEC13-208ENST00000397109 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms