RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 RFFLQ8WZ73 363 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.41
PDXDC1-202ENST00000396410 PSAPP07602 524 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 RFX1P22670 979 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.411e-7■■■□□ 19
PDXDC1-202ENST00000396410 COL20A1Q9P218 1284 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 FOCADQ5VW36 1801 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 FDX1P10109 184 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 PRKCIP41743 596 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 CDR1P51861 262 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 SWSAP1Q6NVH7 229 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 LRRC45Q96CN5 670 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 AGPAT1Q99943 283 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 RASAL2Q9UJF2 1139 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 TISP43B9A030 160 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 DDX3XO00571 662 aaKnown RBP eCLIP12.51□□□□□ -0.412e-13■□□□□ 8.8
PDXDC1-202ENST00000396410 NR3C2P08235 984 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 LIG4P49917 911 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 PDE6CP51160 858 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 WDR44Q5JSH3 913 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 NT5C1BQ96P26 610 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 DBR1Q9UK59 544 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
PDXDC1-202ENST00000396410 FGGP02679 453 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 TNNI1P19237 187 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 CARSP49589 748 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 MESDQ14696 234 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 KCTD16Q68DU8 428 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF746Q6NUN9 644 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 ANKRD35Q8N283 1001 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 MTMR14Q8NCE2 650 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 PDCD2LQ9BRP1 358 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 TIPINQ9BVW5 301 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 PXMP2Q9NR77 195 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 COL11A2P13942 1736 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 QSER1Q2KHR3 1735 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 FOXN3O00409 490 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 CDHR1Q96JP9 859 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 INTUQ9ULD6 942 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 WHAMMQ8TF30 809 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 UBIAD1Q9Y5Z9 338 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 CCDC188H7C350 402 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 RAD51CO43502 376 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 FTLP02792 175 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 ZNF131P52739 623 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 MOV10L1Q9BXT6 1211 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
PDXDC1-202ENST00000396410 ZEB2O60315 1214 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 GLI1P08151 1106 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 TMEM253P0C7T8 217 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 MIS18BP1Q6P0N0 1132 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 METTL13Q8N6R0 699 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 PROCA1Q8NCQ7 364 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 AENQ8WTP8 325 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 TCHPQ9BT92 498 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 SCN9AQ15858 1988 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 ANKRD62A6NC57 917 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 SNRNP35Q16560 246 aaKnown RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 C4orf19Q8IY42 314 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 PLVAPQ9BX97 442 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 OSGEPQ9NPF4 335 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 BACE1P56817 501 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 TGFB2P61812 414 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 DLG4P78352 724 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 KRT39Q6A163 491 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 DEPTORQ8TB45 409 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 CLEC4DQ8WXI8 215 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 AJAP1Q9UKB5 411 aaPredicted RBP12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
PDXDC1-202ENST00000396410 VWA5AO00534 786 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms