RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FGFBP2Q9BYJ0 223 aa15.03■□□□□ -0
VAPB-202ENST00000395802 TRIM5Q9C035 493 aa15.03■□□□□ -0
VAPB-202ENST00000395802 HSD3B7Q9H2F3 369 aa15.03■□□□□ -0
VAPB-202ENST00000395802 AKT3Q9Y243 479 aa15.03■□□□□ -0
VAPB-202ENST00000395802 MYADML2A6NDP7 307 aa15.02■□□□□ -0
VAPB-202ENST00000395802 PHKA2P46019 1235 aa15.02■□□□□ -0
VAPB-202ENST00000395802 PMS1P54277 932 aaKnown RBP15.02■□□□□ -0
VAPB-202ENST00000395802 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
VAPB-202ENST00000395802 CDKAL1Q5VV42 579 aa15.02■□□□□ -0
VAPB-202ENST00000395802 CCSAPQ6IQ19 270 aaPredicted RBP15.02■□□□□ -0
VAPB-202ENST00000395802 FBXO46Q6PJ61 603 aaPredicted RBP15.02■□□□□ -0
VAPB-202ENST00000395802 ZNF410Q86VK4 478 aa15.02■□□□□ -0
VAPB-202ENST00000395802 SESTD1Q86VW0 696 aa15.02■□□□□ -0
VAPB-202ENST00000395802 RNF149Q8NC42 400 aa15.02■□□□□ -0
VAPB-202ENST00000395802 ASAP3Q8TDY4 903 aa15.02■□□□□ -0
VAPB-202ENST00000395802 SH3TC2Q8TF17 1288 aa15.02■□□□□ -0
VAPB-202ENST00000395802 BSNDQ8WZ55 320 aa15.02■□□□□ -0
VAPB-202ENST00000395802 MED15Q96RN5 788 aa15.02■□□□□ -0
VAPB-202ENST00000395802 KBTBD13C9JR72 458 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 NR2F2P24468 414 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 CLCN3P51790 818 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 CAPSQ13938 189 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 PCBP1Q15365 356 aaKnown RBP eCLIP15.01□□□□□ -0.01
VAPB-202ENST00000395802 MAPK6Q16659 721 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 MARCH8Q5T0T0 291 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 LHX8Q68G74 356 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 FILIP1Q7Z7B0 1213 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 RSPH3Q86UC2 560 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 LINC01465Q8N7H1 131 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 VTI1AQ96AJ9 217 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 DUSP9Q99956 384 aaKnown RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 SAMSN1Q9NSI8 373 aaKnown RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 HDAC6Q9UBN7 1215 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 KCNJ18B7U540 433 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 HNRNPDLO14979 420 aaKnown RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 KIAA0391O15091 583 aaKnown RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 SRGAP2CP0DJJ0 459 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 HSPA8P11142 646 aaKnown RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 CYP2C9P11712 490 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 HOXC8P31273 242 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 ZNF75DP51815 510 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 ACLYP53396 1101 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 KCNJ12Q14500 433 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 TCP11X2Q5H9J9 407 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 CREBRFQ8IUR6 639 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 SLC9A9Q8IVB4 645 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 C12orf56Q8IXR9 622 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 BICD1Q96G01 975 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 PAK6Q9NQU5 681 aaPredicted RBP15.01□□□□□ -0.01
VAPB-202ENST00000395802 GTF2IRD1Q9UHL9 959 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 FRMD4BQ9Y2L6 1034 aa15.01□□□□□ -0.01
VAPB-202ENST00000395802 CENPFP49454 3210 aa15□□□□□ -0.01
VAPB-202ENST00000395802 LRRC10BA6NIK2 292 aa15□□□□□ -0.01
VAPB-202ENST00000395802 SLC16A3O15427 465 aaKnown RBP15□□□□□ -0.01
VAPB-202ENST00000395802 NR3C1P04150 777 aa15□□□□□ -0.01
VAPB-202ENST00000395802 CAPN2P17655 700 aa15□□□□□ -0.01
VAPB-202ENST00000395802 HOXD13P35453 343 aa15□□□□□ -0.01
VAPB-202ENST00000395802 UBASH3AP57075 661 aa15□□□□□ -0.01
VAPB-202ENST00000395802 IRX5P78411 483 aaPredicted RBP15□□□□□ -0.01
VAPB-202ENST00000395802 ADAM17P78536 824 aa15□□□□□ -0.01
VAPB-202ENST00000395802 FANCCQ00597 558 aa15□□□□□ -0.01
VAPB-202ENST00000395802 DRP2Q13474 957 aa15□□□□□ -0.01
VAPB-202ENST00000395802 NBPF20Q3BBV1 942 aa15□□□□□ -0.01
VAPB-202ENST00000395802 SLFN12LQ6IEE8 588 aa15□□□□□ -0.01
VAPB-202ENST00000395802 TRIM44Q96DX7 344 aaPredicted RBP15□□□□□ -0.01
VAPB-202ENST00000395802 NLRP4Q96MN2 994 aa15□□□□□ -0.01
VAPB-202ENST00000395802 SCLT1Q96NL6 688 aa15□□□□□ -0.01
VAPB-202ENST00000395802 MKNK1Q9BUB5 465 aa15□□□□□ -0.01
VAPB-202ENST00000395802 KIFC3Q9BVG8 833 aa15□□□□□ -0.01
VAPB-202ENST00000395802 INO80BQ9C086 356 aaPredicted RBP15□□□□□ -0.01
VAPB-202ENST00000395802 RNF208Q9H0X6 261 aa15□□□□□ -0.01
VAPB-202ENST00000395802 METTL14Q9HCE5 456 aaKnown RBP15□□□□□ -0.01
VAPB-202ENST00000395802 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
VAPB-202ENST00000395802 TGFB1I1O43294 461 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 EPB41P11171 864 aaKnown RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 LIG4P49917 911 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 PTENP60484 403 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 KCNA1Q09470 495 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 ZC3H3Q8IXZ2 948 aaKnown RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 KIAA0319LQ8IZA0 1049 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 NLRP7Q8WX94 980 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 MRFAP1L1Q96HT8 127 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 PRIMPOLQ96LW4 560 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 PRMT7Q9NVM4 692 aaPredicted RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 LIMA1Q9UHB6 759 aaKnown RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 M0QZ92 97 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 DNM1LO00429 736 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 ATP1A3P13637 1013 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 NCBP1Q09161 790 aaKnown RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 HS1BP3Q53T59 392 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 FAM47CQ5HY64 1035 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 ARMCX5Q6P1M9 558 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 ZPBP2Q6X784 338 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 LRRC55Q6ZSA7 311 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms