RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PCSK7Q16549 785 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 ERFEQ4G0M1 354 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 BHMTQ93088 406 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 GJB4Q9NTQ9 266 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 HDAC6Q9UBN7 1215 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 MAD2L2Q9UI95 211 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 A0A087WUV0 522 aaPredicted RBP13.01□□□□□ -0.33
SIN3A-202ENST00000394947 ZNF699Q32M78 642 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 CENPTQ96BT3 561 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 NUP85Q9BW27 656 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
SIN3A-202ENST00000394947 YEATS2Q9ULM3 1422 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 UBXN8O00124 270 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 KCNA6P17658 529 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 GAP43P17677 238 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 CCNA1P78396 465 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 ADCY2Q08462 1091 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 LCORLQ8N3X6 602 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 STX19Q8N4C7 294 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 C11orf70Q9BRQ4 267 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
SIN3A-202ENST00000394947 TRIM8Q9BZR9 551 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 RAVER2Q9HCJ3 691 aaKnown RBP13.01□□□□□ -0.33
SIN3A-202ENST00000394947 SLC16A4O15374 487 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 NDUFB5O43674 189 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 KRT7P08729 469 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 HDAC4P56524 1084 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 ARL4CP56559 192 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 LMBRD2Q68DH5 695 aaPredicted RBP13.01□□□□□ -0.33
SIN3A-202ENST00000394947 APOA5Q6Q788 366 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 SNRNP27Q8WVK2 155 aaKnown RBP13.01□□□□□ -0.33
SIN3A-202ENST00000394947 ADAM22Q9P0K1 906 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 ZNF212Q9UDV6 495 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 AKAP10O43572 662 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 CHGBP05060 677 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 SERPINB2P05120 415 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 FAM117BQ6P1L5 589 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 BNIPLQ7Z465 357 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 FGD2Q7Z6J4 655 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 SIX5Q8N196 739 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 CLEC4FQ8N1N0 589 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 PAGE5Q96GU1 130 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 TMEM206Q9H813 350 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 TRIM33Q9UPN9 1127 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
SIN3A-202ENST00000394947 HAUS5O94927 633 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 CDC37Q16543 378 aaPredicted RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 AKIRIN2Q53H80 203 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 SAAL1Q96ER3 474 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 FAM118BQ9BPY3 351 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ENO4A6NNW6 628 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 XPO1O14980 1071 aaKnown RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 UPP2O95045 317 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ARL4DP49703 201 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 DHX35Q9H5Z1 703 aaKnown RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 DOLKQ9UPQ8 538 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 BMP3P12645 472 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ATP1A3P13637 1013 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 ZNF568Q3ZCX4 644 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ACTR5Q9H9F9 607 aaPredicted RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 ALDH6A1Q02252 535 aaKnown RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 NCAPHQ15003 741 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 FAM81BQ96LP2 452 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 DYRK4Q9NR20 520 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 KPNA7A9QM74 516 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 MYO1DO94832 1006 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ENO3P13929 434 aaPredicted RBP13□□□□□ -0.33
SIN3A-202ENST00000394947 TRIM32Q13049 653 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 SYTL3Q4VX76 610 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 LAYNQ6UX15 382 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 C10orf53Q8N6V4 93 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 BHMT2Q9H2M3 363 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 RGL1Q9NZL6 768 aa13□□□□□ -0.33
SIN3A-202ENST00000394947 C5orf58C9J3I9 102 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 CPB1P15086 417 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 PMS2P54278 862 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 ARHGAP17Q68EM7 881 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 ARMC9Q7Z3E5 817 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 LRRC37BQ96QE4 947 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 KRT37O76014 449 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 PARNO95453 639 aaKnown RBP12.99□□□□□ -0.33
SIN3A-202ENST00000394947 CAPN1P07384 714 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 NBPF15Q8N660 670 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 COG1Q8WTW3 980 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
SIN3A-202ENST00000394947 TRIM45Q9H8W5 580 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms