RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SUCLA2Q9P2R7 463 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-203ENST00000394925 SNX14Q9Y5W7 946 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 IRAK3Q9Y616 596 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 SPTBN4Q9H254 2564 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 IGKV6-21A0A0C4DH24 114 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 GALTP07902 379 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 SKIP12755 728 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 IFNAR1P17181 557 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 CCT2P78371 535 aaKnown RBP23.74■■□□□ 1.39
TRAF4-203ENST00000394925 GIT2Q14161 759 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 FEZF2Q8TBJ5 459 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 RSPH1Q8WYR4 309 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 INO80BQ9C086 356 aaPredicted RBP23.74■■□□□ 1.39
TRAF4-203ENST00000394925 NCOA5Q9HCD5 579 aaKnown RBP23.74■■□□□ 1.39
TRAF4-203ENST00000394925 FAM105AQ9NUU6 356 aa23.74■■□□□ 1.39
TRAF4-203ENST00000394925 DDX11L8A8MPP1 907 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 TDP2O95551 362 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 RPS6KB1P23443 525 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 Q4G0T1 1027 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 TMC5Q6UXY8 1006 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 CATSPER4Q7RTX7 472 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 CABP7Q86V35 215 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 ZNF410Q86VK4 478 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 KSR1Q8IVT5 923 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 PLCD3Q8N3E9 789 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 MFSD1Q9H3U5 465 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 SH3GLB2Q9NR46 395 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 DNAJB4Q9UDY4 337 aa23.73■■□□□ 1.39
TRAF4-203ENST00000394925 CARNS1A5YM72 827 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 OFD1O75665 1012 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 SLC11A1P49279 550 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 ASTLQ6HA08 431 aaPredicted RBP23.72■■□□□ 1.39
TRAF4-203ENST00000394925 FBXL16Q8N461 479 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 NLRP4Q96MN2 994 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 AGXT2Q9BYV1 514 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 USTQ9Y2C2 406 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 VPS13AQ96RL7 3174 aa23.72■■□□□ 1.39
TRAF4-203ENST00000394925 SPDYE4A6NLX3 237 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 PROB1E7EW31 1015 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 MAFO75444 373 aaPredicted RBP23.71■■□□□ 1.39
TRAF4-203ENST00000394925 PDIA3P30101 505 aaKnown RBP23.71■■□□□ 1.39
TRAF4-203ENST00000394925 HSPA4P34932 840 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 B3GNT9Q6UX72 402 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 ZNF280BQ86YH2 543 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 VN1R3Q9BXE9 311 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 C22orf23Q9BZE7 217 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 PCDHA4Q9UN74 947 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 DMDP11532 3685 aa23.71■■□□□ 1.39
TRAF4-203ENST00000394925 FAM186AA6NE01 2351 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 B4GALT3O60512 393 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 ZNF623O75123 536 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 RAB27AP51159 221 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 PTPN14Q15678 1187 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 PLA2G4FQ68DD2 849 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 ANO5Q75V66 913 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 ASCL5Q7RTU5 278 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 PPFIBP1Q86W92 1011 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 PGBD4Q96DM1 585 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 CYP26B1Q9NR63 512 aa23.7■■□□□ 1.38
TRAF4-203ENST00000394925 DENND4AQ7Z401 1863 aa23.69■■□□□ 1.38
TRAF4-203ENST00000394925 CYP3A7-CYP3A51PA0A087WV96 503 aa23.69■■□□□ 1.38
TRAF4-203ENST00000394925 SSBP05455 408 aaKnown RBP eCLIP23.69■■□□□ 1.38
TRAF4-203ENST00000394925 CYP3A7P24462 503 aa23.69■■□□□ 1.38
TRAF4-203ENST00000394925 URGCPQ8TCY9 931 aa23.69■■□□□ 1.38
TRAF4-203ENST00000394925 ACSF2Q96CM8 615 aaPredicted RBP23.69■■□□□ 1.38
TRAF4-203ENST00000394925 SFXN1Q9H9B4 322 aa23.69■■□□□ 1.38
TRAF4-203ENST00000394925 PCDHB2Q9Y5E7 798 aa23.69■■□□□ 1.38
TRAF4-203ENST00000394925 KLRC2P26717 231 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 PSMC5P62195 406 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 SSRP1Q08945 709 aaKnown RBP23.68■■□□□ 1.38
TRAF4-203ENST00000394925 AGMOQ6ZNB7 445 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 CENPQQ7L2Z9 268 aaPredicted RBP23.68■■□□□ 1.38
TRAF4-203ENST00000394925 GPR149Q86SP6 731 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 TRIM22Q8IYM9 498 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 BLIDQ8IZY5 108 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 FLCNQ8NFG4 579 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 ETNPPLQ8TBG4 499 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 KLHL5Q96PQ7 755 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 JPH2Q9BR39 696 aaPredicted RBP23.68■■□□□ 1.38
TRAF4-203ENST00000394925 EMILIN2Q9BXX0 1053 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 IFT122Q9HBG6 1241 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 AGPAT5Q9NUQ2 364 aa23.68■■□□□ 1.38
TRAF4-203ENST00000394925 DDHD2O94830 711 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 NBL1P41271 181 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 CLCN4P51793 760 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 CLCN5P51795 746 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 AFF1P51825 1210 aaKnown RBP23.67■■□□□ 1.38
TRAF4-203ENST00000394925 CCDC149Q6ZUS6 474 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 MBOAT7Q96N66 472 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 COL4A3BPQ9Y5P4 624 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 C2orf16Q68DN1 1984 aa23.67■■□□□ 1.38
TRAF4-203ENST00000394925 PRR23AA6NEV1 266 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 EML1O00423 815 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 ALDH2P05091 517 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 CNPP09543 421 aaKnown RBP23.66■■□□□ 1.38
TRAF4-203ENST00000394925 PSMA5P28066 241 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 NPEPPSP55786 919 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 EVCP57679 992 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 OTOP3Q7RTS5 596 aa23.66■■□□□ 1.38
TRAF4-203ENST00000394925 FAM193BQ96PV7 902 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms