RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GOLGA8MH3BSY2 632 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 CYP26B1Q9NR63 512 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 PCSK1NQ9UHG2 260 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 SPATA31E1Q6ZUB1 1445 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 EIF3BP55884 814 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 RASIP1Q5U651 963 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 NUP85Q9BW27 656 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 INTS2Q9H0H0 1204 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 XAB2Q9HCS7 855 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 RALAP11233 206 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ADCY2Q08462 1091 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 CUL1Q13616 776 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 CRLF3Q8IUI8 442 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 GPD1LQ8N335 351 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 SPON1Q9HCB6 807 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 RBAKQ9NYW8 714 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 PODXLO00592 558 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 PPP1R12AO14974 1030 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 EFHC2Q5JST6 749 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 DYRK4Q9NR20 520 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 SUN2Q9UH99 717 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 COPEO14579 308 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 KRT37O76014 449 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 PRCPP42785 496 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ARHGDIAP52565 204 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 NCLNQ969V3 563 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 SPON2Q9BUD6 331 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 TSR3Q9UJK0 312 aaKnown RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 CRB1P82279 1406 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 KBTBD13C9JR72 458 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 DNAJC8O75937 253 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 LCP1P13796 627 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 KYAT1Q16773 422 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 GLE1Q53GS7 698 aaKnown RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 BTBD8Q5XKL5 378 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ALS2CLQ60I27 953 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 LDHDQ86WU2 507 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 SLC7A5P2Q9GIP4 190 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ABCC3O15438 1527 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 TRPA1O75762 1119 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ATP1A3P13637 1013 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 CACNB2Q08289 660 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ORC2Q13416 577 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 HSP90AA5PQ58FG0 334 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 GAS2L3Q86XJ1 694 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF564Q8TBZ8 553 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-203ENST00000394872 TTC17Q96AE7 1141 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 IP6K2Q9UHH9 426 aa11.07□□□□□ -0.64
COL4A6-203ENST00000394872 ANP32DO95626 131 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 AKR1B1P15121 316 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 EEF1B2P24534 225 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 SSTR3P32745 418 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 IFNA8P32881 189 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 GRIK1P39086 918 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 GFPT1Q06210 699 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 CC2D1AQ6P1N0 951 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TTC23LQ6PF05 361 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 RASSF3Q86WH2 238 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TTC8Q8TAM2 541 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 GTSE1Q9NYZ3 720 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 PIN4Q9Y237 131 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TMCC1O94876 653 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 KLHL29Q96CT2 875 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 CNOT7Q9UIV1 285 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 PRDM15P57071 1507 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 PVALEFA0A1B0GWK0 134 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 GCKP35557 465 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 KCNJ6P48051 423 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ULK4Q96C45 1275 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 FAM84BQ96KN1 310 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 MYCBPQ99417 103 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 SIK2Q9H0K1 926 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TRPC7Q9HCX4 862 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 AGO2Q9UKV8 859 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ZNRF3Q9ULT6 936 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 CHD1O14646 1710 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 WDR19Q8NEZ3 1342 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 LGALS16A8MUM7 142 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms