RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 MUTP22033 750 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 FMR1Q06787 632 aaKnown RBP eCLIP20.91■□□□□ 0.94
CXXC4-201ENST00000394767 PAK2Q13177 524 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 VSTM4Q8IW00 320 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 ATP8B4Q8TF62 1192 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 VTNP04004 478 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 FSCN1Q16658 493 aaKnown RBP20.91■□□□□ 0.94
CXXC4-201ENST00000394767 COPS5Q92905 334 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 SLC5A5Q92911 643 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 PGBD4Q96DM1 585 aa20.91■□□□□ 0.94
CXXC4-201ENST00000394767 MTG1Q9BT17 334 aaPredicted RBP20.91■□□□□ 0.94
CXXC4-201ENST00000394767 CYP3A4P08684 503 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 BEX3Q00994 111 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 SHCBP1Q8NEM2 672 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 C17orf75Q9HAS0 396 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 KIAA0391O15091 583 aaKnown RBP20.9■□□□□ 0.94
CXXC4-201ENST00000394767 HADHQ16836 314 aaKnown RBP20.9■□□□□ 0.94
CXXC4-201ENST00000394767 NOL9Q5SY16 702 aaKnown RBP20.9■□□□□ 0.94
CXXC4-201ENST00000394767 ILDR2Q71H61 639 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 UBA1P22314 1058 aaKnown RBP20.9■□□□□ 0.94
CXXC4-201ENST00000394767 RFX1P22670 979 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 ZNF653Q96CK0 615 aa20.9■□□□□ 0.94
CXXC4-201ENST00000394767 A0A0G2JLL6 359 aaPredicted RBP20.89■□□□□ 0.94
CXXC4-201ENST00000394767 CCDC144BQ3MJ40 725 aa20.89■□□□□ 0.94
CXXC4-201ENST00000394767 PRRT2Q7Z6L0 340 aaPredicted RBP20.89■□□□□ 0.94
CXXC4-201ENST00000394767 KIAA1524Q8TCG1 905 aa20.89■□□□□ 0.94
CXXC4-201ENST00000394767 APBA2Q99767 749 aa20.89■□□□□ 0.94
CXXC4-201ENST00000394767 MYO1FO00160 1098 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 IL31RAQ8NI17 732 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 TMEM270Q6UE05 265 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 ATP8B3O60423 1300 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 XIRP1Q702N8 1843 aaKnown RBP20.89■□□□□ 0.93
CXXC4-201ENST00000394767 PSMC6P62333 389 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 PORCNQ9H237 461 aa20.89■□□□□ 0.93
CXXC4-201ENST00000394767 IGKV6D-41A0A0C4DH26 115 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 ANXA13P27216 316 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 BCCIPQ9P287 314 aaKnown RBP eCLIP20.88■□□□□ 0.93
CXXC4-201ENST00000394767 SIX6OS1Q8N1H7 587 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 BPIFA3Q9BQP9 254 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 POLIQ9UNA4 740 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 ATP2A1O14983 1001 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 ITGA4P13612 1032 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 SNRNP35Q16560 246 aaKnown RBP20.88■□□□□ 0.93
CXXC4-201ENST00000394767 KRT81Q14533 505 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 OR6B2Q6IFH4 312 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 NOTUMQ6P988 496 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 FRMD5Q7Z6J6 570 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 FBXL13Q8NEE6 735 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 SLU7O95391 586 aaKnown RBP20.88■□□□□ 0.93
CXXC4-201ENST00000394767 PHLDB2Q86SQ0 1253 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 REM2Q8IYK8 340 aaPredicted RBP20.88■□□□□ 0.93
CXXC4-201ENST00000394767 ENGASEQ8NFI3 743 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 BTBD7Q9P203 1132 aa20.88■□□□□ 0.93
CXXC4-201ENST00000394767 EML1O00423 815 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 FUT2Q10981 343 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 GLB1LQ6UWU2 654 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 REPS2Q8NFH8 660 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.87■□□□□ 0.93
CXXC4-201ENST00000394767 PPP2R2CQ9Y2T4 447 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 V9GYY5 206 aaPredicted RBP20.87■□□□□ 0.93
CXXC4-201ENST00000394767 PGK1P00558 417 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 CDC25BP30305 580 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 TSPY1Q01534 308 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 GRIK4Q16099 956 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 OTUD6BQ8N6M0 293 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 IKBKGQ9Y6K9 419 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 SLITRK3O94933 977 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 EIF4A3P38919 411 aaKnown RBP20.87■□□□□ 0.93
CXXC4-201ENST00000394767 PPP2R5CQ13362 524 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
CXXC4-201ENST00000394767 TBX20Q9UMR3 447 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 MESDQ14696 234 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 HAUS4Q9H6D7 363 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 AGAP1Q9UPQ3 857 aa20.87■□□□□ 0.93
CXXC4-201ENST00000394767 AP3M2P53677 418 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 SOX10P56693 466 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 SCN4BQ8IWT1 228 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 TRIM58Q8NG06 486 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.86■□□□□ 0.93
CXXC4-201ENST00000394767 TRAPPC12Q8WVT3 735 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 COMMD10Q9Y6G5 202 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 EIF3DO15371 548 aaKnown RBP eCLIP20.86■□□□□ 0.93
CXXC4-201ENST00000394767 PQBP1O60828 265 aaKnown RBP20.86■□□□□ 0.93
CXXC4-201ENST00000394767 PPP1R11O60927 126 aaPredicted RBP20.86■□□□□ 0.93
CXXC4-201ENST00000394767 MFSD10Q14728 455 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 TTLL3Q9Y4R7 772 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 TMEM150BA6NC51 233 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 PRKAR2AP13861 404 aaKnown RBP20.86■□□□□ 0.93
CXXC4-201ENST00000394767 NPTX2P47972 431 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 BFSP2Q13515 415 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 ZNF365Q70YC5 407 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 PRIMPOLQ96LW4 560 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 ADAMTS1Q9UHI8 967 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 NPTXRO95502 500 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 CALCOCO2Q13137 446 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 WDR72Q3MJ13 1102 aa20.86■□□□□ 0.93
CXXC4-201ENST00000394767 GJC2Q5T442 439 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms