RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 TOM1L1O75674 476 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 IFT88Q13099 833 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 LRRC14Q15048 493 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 LY6KQ17RY6 165 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 DEPDC1BQ8WUY9 529 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 CRAMP1Q96RY5 1269 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 DDX47Q9H0S4 455 aaKnown RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 CAPN7Q9Y6W3 813 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 CLTAP09496 248 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 ADRA2BP18089 450 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 NSUN2Q08J23 767 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDH11-202ENST00000394156 ARL6IP4Q66PJ3 421 aaKnown RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 RUSC1Q9BVN2 902 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 ADAM22Q9P0K1 906 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 MST1RQ04912 1400 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 RGPD5Q99666 1765 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 ATP5DP30049 168 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 TOB1P50616 345 aaPredicted RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 TTLL4Q14679 1199 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 STMN2Q93045 179 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 MCUR1Q96AQ8 359 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 TRPC7Q9HCX4 862 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 FAM49BQ9NUQ9 324 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 MOSPD1Q9UJG1 213 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 COL3A1P02461 1466 aaPredicted RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 SHPRHQ149N8 1683 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 GOLGA8RI6L899 631 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 DR1Q01658 176 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 RSPH3Q86UC2 560 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 FAF2Q96CS3 445 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 SARS2Q9NP81 518 aaKnown RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 LGALS16A8MUM7 142 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 P4HBP07237 508 aaKnown RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 MDH1BQ5I0G3 518 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 BARGINQ6ZT62 677 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 CCDC170Q8IYT3 715 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 AGAP3Q96P47 875 aa9.78□□□□□ -0.84
CDH11-202ENST00000394156 AGO2Q9UKV8 859 aaKnown RBP9.78□□□□□ -0.84
CDH11-202ENST00000394156 DFFAO00273 331 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 MCF2LO15068 1137 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 FXR1P51114 621 aaKnown RBP eCLIP9.77□□□□□ -0.84
CDH11-202ENST00000394156 ZBED6P86452 979 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 ZSCAN26Q16670 478 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 SH2D4BQ5SQS7 431 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 RAET1EQ8TD07 263 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 IL17RBQ9NRM6 502 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 HACD3Q9P035 362 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 TSKSQ9UJT2 592 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 DUSP10Q9Y6W6 482 aa9.77□□□□□ -0.84
CDH11-202ENST00000394156 TNPO2O14787 897 aaKnown RBP9.77□□□□□ -0.85
CDH11-202ENST00000394156 RPSAP08865 295 aaKnown RBP9.77□□□□□ -0.85
CDH11-202ENST00000394156 DPYDQ12882 1025 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 BRD3Q15059 726 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 MAP1SQ66K74 1059 aaPredicted RBP9.77□□□□□ -0.85
CDH11-202ENST00000394156 HAUS6Q7Z4H7 955 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 XXYLT1Q8NBI6 393 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 USP33Q8TEY7 942 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 CPA4Q9UI42 421 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 PNMA3Q9UL41 463 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 CPP00450 1065 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 SOX11P35716 441 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 ALX1Q15699 326 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 PARD3BQ8TEW8 1205 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 UBE4BO95155 1302 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 UBR1Q8IWV7 1749 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 GIPC1O14908 333 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 INHBAP08476 426 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 SLMAPQ14BN4 828 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 CEP55Q53EZ4 464 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 ARHGEF18Q6ZSZ5 1173 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 PRKAG2Q9UGJ0 569 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 PASKQ96RG2 1323 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 PEAK1Q9H792 1746 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 CCL15-CCL14A0A0B4J2E2 113 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 MED24O75448 989 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 RPS6P62753 249 aaKnown RBP9.77□□□□□ -0.85
CDH11-202ENST00000394156 AP3B2Q13367 1082 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.85
CDH11-202ENST00000394156 CCL15Q16663 113 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 ZNF667Q5HYK9 610 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 RTFDC1Q9BY42 306 aaPredicted RBP9.77□□□□□ -0.85
CDH11-202ENST00000394156 HSPBP1Q9NZL4 362 aa9.77□□□□□ -0.85
CDH11-202ENST00000394156 STAT5BP51692 787 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 JAK3P52333 1124 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
CDH11-202ENST00000394156 PDE1BQ01064 536 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 PRKCEQ02156 737 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 EFCAB12Q6NXP0 572 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 PSMC6P62333 389 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 ZNF564Q8TBZ8 553 aaPredicted RBP9.76□□□□□ -0.85
CDH11-202ENST00000394156 RNF139Q8WU17 664 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 HDAC11Q96DB2 347 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 SLC13A1Q9BZW2 595 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
CDH11-202ENST00000394156 KCNH7Q9NS40 1196 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms