RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 NEK9Q8TD19 979 aa21.68■■□□□ 1.06
CSNK1D-203ENST00000392334 MAF1Q9H063 256 aa21.68■■□□□ 1.06
CSNK1D-203ENST00000392334 GABBR1Q9UBS5 961 aa21.68■■□□□ 1.06
CSNK1D-203ENST00000392334 PLXNB2O15031 1838 aa21.68■■□□□ 1.06
CSNK1D-203ENST00000392334 GOLGA6BA6NDN3 693 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 RBAK-RBAKDNI3L0D1 243 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 MOCS3O95396 460 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 COPB2P35606 906 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 PLA2G4FQ68DD2 849 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 ZNF746Q6NUN9 644 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 C17orf99Q6UX52 265 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 GSPT2Q8IYD1 628 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 DEF6Q9H4E7 631 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 TSKSQ9UJT2 592 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 KIAA1217Q5T5P2 1943 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 LRRC53A6NM62 1247 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 TRIM66O15016 1216 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 AKR1B10O60218 316 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 MUTP22033 750 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 EDNRBP24530 442 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 SFNP31947 248 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 ACTR2P61160 394 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 LY6KQ17RY6 165 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 C10orf67Q8IYJ2 551 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 MYCT1Q8N699 235 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 FAM76AQ8TAV0 307 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 SCFD1Q8WVM8 642 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 SH3GL2Q99962 352 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 ZFYVE28Q9HCC9 887 aa21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 FAM207AQ9NSI2 230 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-203ENST00000392334 DNAJC25-GNG10A0A024R161 153 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 CLSTN1O94985 981 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 MYBP10242 640 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 MAGEA1P43355 309 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 EPHB4P54760 987 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 NPEPPSP55786 919 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 PSMC5P62195 406 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 GLE1Q53GS7 698 aaKnown RBP21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 EMBQ6PCB8 327 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 PADI6Q6TGC4 694 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 GPR142Q7Z601 462 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 KCTD17Q8N5Z5 321 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 SYN2Q92777 582 aaPredicted RBP21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 ZBTB9Q96C00 473 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 TSG101Q99816 390 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 LRRC1Q9BTT6 524 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 NUCKS1Q9H1E3 243 aaKnown RBP21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 MMRN2Q9H8L6 949 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 RNF14Q9UBS8 474 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 MCM3APO60318 1980 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 DOCK5Q9H7D0 1870 aa21.66■■□□□ 1.06
CSNK1D-203ENST00000392334 GOLGA8KD6RF30 607 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 FAM13AO94988 1023 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 RARRES1P49788 294 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.65■■□□□ 1.064e-6■□□□□ 10.9
CSNK1D-203ENST00000392334 RRAGAQ7L523 313 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 RIN2Q8WYP3 895 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 DMGDHQ9UI17 866 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 EPB41P11171 864 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 UBA1P22314 1058 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 ADORA2AP29274 412 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 VEGFBP49765 207 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 CCDC60Q8IWA6 550 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 FBXO16Q8IX29 292 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 CAVIN3Q969G5 261 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 CCDC43Q96MW1 224 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 COL4A3BPQ9Y5P4 624 aa21.65■■□□□ 1.06
CSNK1D-203ENST00000392334 NFASCO94856 1347 aa21.64■■□□□ 1.06
CSNK1D-203ENST00000392334 GOLGA6CA6NDK9 693 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 BACH1O14867 736 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 CA12O43570 354 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 GOLGA6DP0CG33 693 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 MAGEA9P43362 315 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 NNTQ13423 1086 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 HGSNATQ68CP4 663 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 GBP6Q6ZN66 633 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 GOLGA6AQ9NYA3 693 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 IVNS1ABPQ9Y6Y0 642 aa21.64■■□□□ 1.05
CSNK1D-203ENST00000392334 PLXNA1Q9UIW2 1896 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 ZNF862O60290 1169 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 HIP1RO75146 1068 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 ARIH2O95376 493 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 GCNT3O95395 438 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 NMT1P30419 496 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 ICAM3P32942 547 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 PAFAH1B1P43034 410 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 CORO7P57737 925 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 KCNA1Q09470 495 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 ZCWPW2Q504Y3 356 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 XKR9Q5GH70 373 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 TMEM63BQ5T3F8 832 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 ALS2CLQ60I27 953 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 NFRKBQ6P4R8 1299 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 ANO5Q75V66 913 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 SND1Q7KZF4 910 aaKnown RBP eCLIP21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 KSR1Q8IVT5 923 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 C4orf19Q8IY42 314 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 GDAP1L1Q96MZ0 367 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 SENP7Q9BQF6 1050 aa21.63■■□□□ 1.05
CSNK1D-203ENST00000392334 TLR10Q9BXR5 811 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms