RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ASAP3Q8TDY4 903 aa14.06□□□□□ -0.16
GGPS1-203ENST00000391855 MRPL9Q9BYD2 267 aaKnown RBP14.06□□□□□ -0.16
GGPS1-203ENST00000391855 C2orf40Q9H1Z8 148 aa14.06□□□□□ -0.16
GGPS1-203ENST00000391855 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
GGPS1-203ENST00000391855 DNM3Q9UQ16 869 aa14.06□□□□□ -0.16
GGPS1-203ENST00000391855 VWA3AA6NCI4 1184 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 INO80B-WBP1J3KQ70 363 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 STX6O43752 255 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 ZNF623O75123 536 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 GLRA2P23416 452 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 RESTQ13127 1097 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 IL17AQ16552 155 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.05□□□□□ -0.16
GGPS1-203ENST00000391855 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 KIFAP3Q92845 792 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 PGBD4Q96DM1 585 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 MRPL38Q96DV4 380 aaKnown RBP14.05□□□□□ -0.16
GGPS1-203ENST00000391855 CDK5RAP3Q96JB5 506 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 PRIMPOLQ96LW4 560 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 TIPINQ9BVW5 301 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 FAM105AQ9NUU6 356 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 MTMR6Q9Y217 621 aa14.05□□□□□ -0.16
GGPS1-203ENST00000391855 CHD9Q3L8U1 2897 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 LAG3P18627 525 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 LONP1P36776 959 aaKnown RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 NAMPTP43490 491 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 SF3A1Q15459 793 aaKnown RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 ECM1Q16610 540 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 FAM102BQ5T8I3 360 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 CDCA2Q69YH5 1023 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 NOTUMQ6P988 496 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 MICALL1Q8N3F8 863 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 MMTAG2Q9BU76 263 aaKnown RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 MINDY3Q9H8M7 445 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 PRMT7Q9NVM4 692 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 THEGQ9P2T0 379 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
GGPS1-203ENST00000391855 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-203ENST00000391855 PHLPP2Q6ZVD8 1323 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 CNTNAP2Q9UHC6 1331 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 A0A087WWV3 80 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 TSPAN1O60635 241 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 FGFR1P11362 822 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 ATF7P17544 494 aaPredicted RBP14.03□□□□□ -0.16
GGPS1-203ENST00000391855 UBA7P41226 1012 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 GATMP50440 423 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 MBTD1Q05BQ5 628 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 SPOUT1Q5T280 376 aaKnown RBP14.03□□□□□ -0.16
GGPS1-203ENST00000391855 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 RNF169Q8NCN4 708 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 PPM1EQ8WY54 764 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 IFT74Q96LB3 600 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 RNF19AQ9NV58 838 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 KCND2Q9NZV8 630 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 KIAA1671Q9BY89 1806 aa14.03□□□□□ -0.16
GGPS1-203ENST00000391855 E9PMD0 336 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 PPM1AP35813 382 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 UBE3AQ05086 875 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 CCDC85BQ15834 202 aaPredicted RBP14.02□□□□□ -0.16
GGPS1-203ENST00000391855 FAM187BQ17R55 369 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 GLB1LQ6UWU2 654 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 CABP7Q86V35 215 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 HACE1Q8IYU2 909 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 DEPTORQ8TB45 409 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 DRC1Q96MC2 740 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 CASD1Q96PB1 797 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 UBN1Q9NPG3 1134 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 KCNG1Q9UIX4 513 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 COG5Q9UP83 839 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 PCDHB2Q9Y5E7 798 aa14.02□□□□□ -0.16
GGPS1-203ENST00000391855 ZMYM2Q9UBW7 1377 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 CDC25AP30304 524 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 EFNA5P52803 228 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 SKIV2LQ15477 1246 aaKnown RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 ZRSR1Q15695 479 aaKnown RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 AMHR2Q16671 573 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 TMEM119Q4V9L6 283 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 CLLU1OSQ5K130 101 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 MRPL10Q7Z7H8 261 aaKnown RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 HELQQ8TDG4 1101 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 ATXN2LQ8WWM7 1075 aaKnown RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 PPP2R3CQ969Q6 453 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 PNMA5Q96PV4 448 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 CSRNP2Q9H175 543 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 NSUN3Q9H649 340 aaKnown RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 C17orf75Q9HAS0 396 aa14.01□□□□□ -0.17
GGPS1-203ENST00000391855 TYW1Q9NV66 732 aaKnown RBP14.01□□□□□ -0.17
GGPS1-203ENST00000391855 CHD7Q9P2D1 2997 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 NCLP19338 710 aaKnown RBP14□□□□□ -0.17
GGPS1-203ENST00000391855 PTPAQ15257 358 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 MAPK6Q16659 721 aa14□□□□□ -0.17
GGPS1-203ENST00000391855 AAK1Q2M2I8 961 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms