RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 FRMD3A2A2Y4 597 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 LRRD1A4D1F6 860 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC151A5D8V7 595 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 SMCHD1A6NHR9 2005 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ENO4A6NNW6 628 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 BECN2A8MW95 431 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ABLIM1O14639 778 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TIMM44O43615 452 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 BUB1BO60566 1050 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 SMIM24O75264 130 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ATP6V1G1O75348 118 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 MTRF1O75570 445 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 LEFTY1O75610 366 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 DNAJC8O75937 253 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TMCC1O94876 653 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 P4HBP07237 508 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 FAM163BP0C2L3 166 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 NPR3P17342 541 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 EIF4BP23588 611 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ADORA1P30542 326 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ATICP31939 592 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 KIF5BP33176 963 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 HSPA4P34932 840 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 MCAMP43121 646 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 MAPK8P45983 427 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ARPC4P59998 168 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ATP2B2Q01814 1243 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ADCY1Q08828 1119 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 EIF2B5Q13144 721 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 NMIQ13287 307 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 GRAPQ13588 217 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 UBE4AQ14139 1066 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 DOCK1Q14185 1865 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 RCN1Q15293 331 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 E2F5Q15329 346 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TTF1Q15361 905 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 SEPT7Q16181 437 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 SLC15A2Q16348 729 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 INAQ16352 499 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ERCC6LQ2NKX8 1250 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC40Q4G0X9 1142 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CAVIN4Q5BKX8 364 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 FBXW10Q5XX13 1052 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CDCA2Q69YH5 1023 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC70Q6NSX1 233 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 KCNV1Q6PIU1 500 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF365Q70YC5 407 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TMC7Q7Z402 723 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 YTHDF3Q7Z739 585 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 UBE2Q1Q7Z7E8 422 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 VPS37DQ86XT2 251 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 COL23A1Q86Y22 540 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 HOMER1Q86YM7 354 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ELOA2Q8IYF1 753 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CEP57L1Q8IYX8 460 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TEX9Q8N6V9 391 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 VGLL2Q8N8G2 317 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ARL10Q8N8L6 244 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 KBTBD3Q8NAB2 608 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CNNM3Q8NE01 707 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 VPS37AQ8NEZ2 397 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 GRAPLQ8TC17 118 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 LMBR1Q8WVP7 490 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TMEM40Q8WWA1 233 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 SREK1Q8WXA9 508 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CELF1Q92879 486 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CUL5Q93034 780 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF653Q96CK0 615 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 MISP3Q96FF7 219 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 WDR89Q96FK6 387 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 DHTKD1Q96HY7 919 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 RBM41Q96IZ5 413 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TMX3Q96JJ7 454 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 HRASLS5Q96KN8 279 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 DHRS1Q96LJ7 313 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 DMRTB1Q96MA1 342 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TTC14Q96N46 770 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 ANKRD27Q96NW4 1050 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CAMKK2Q96RR4 588 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 HAUS7Q99871 368 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 WDR18Q9BV38 432 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TRIM5Q9C035 493 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 IRF2BPLQ9H1B7 796 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 VCX3BQ9H321 246 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CENPHQ9H3R5 247 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 RETREG1Q9H6L5 497 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 VCX3AQ9NNX9 186 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 SSU72Q9NP77 194 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 PAPOLBQ9NRJ5 636 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 KCND1Q9NSA2 647 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 KLC4Q9NSK0 619 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 RABL2AQ9UBK7 228 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CIDEBQ9UHD4 219 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 PUF60Q9UHX1 559 aaKnown RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 WWC3Q9ULE0 1092 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 CORO1CQ9ULV4 474 aaPredicted RBP2.89□□□□□ -1.95
TRAV41-201ENST00000390468 TMED5Q9Y3A6 229 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 COMMD10Q9Y6G5 202 aa2.89□□□□□ -1.95
TRAV41-201ENST00000390468 WDR33Q9C0J8 1336 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms