RNA–Protein interactions for RNA: ENST00000390372.3

TRBV5-5-201, Transcript of T cell receptor beta variable 5-5, humanhuman

APPRIS P1 BASIC

Gene TRBV5-5, Length 350 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5-201ENST00000390372 CALML4Q96GE6 196 aa12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 MRPL9Q9BYD2 267 aaKnown RBP12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 FAM105AQ9NUU6 356 aa12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 KCNG1Q9UIX4 513 aa12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
TRBV5-5-201ENST00000390372 PP2D1A8MPX8 630 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 LPXNO60711 386 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 ZNF623O75123 536 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 FGFR1P11362 822 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 LAG3P18627 525 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 CDC25AP30304 524 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 NAMPTP43490 491 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 RESTQ13127 1097 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 ECM1Q16610 540 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 HYIQ5T013 277 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 NOTUMQ6P988 496 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 CABP7Q86V35 215 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 DEPTORQ8TB45 409 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 ASAP3Q8TDY4 903 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 MRPL38Q96DV4 380 aaKnown RBP12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 DRC1Q96MC2 740 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 UBN1Q9NPG3 1134 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 MTMR6Q9Y217 621 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
TRBV5-5-201ENST00000390372 PHLPP2Q6ZVD8 1323 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 TTC3P53804 2025 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 E9PMD0 336 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 TSPAN1O60635 241 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 GATMP50440 423 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 EFNA5P52803 228 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 MBTD1Q05BQ5 628 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 AAK1Q2M2I8 961 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 TIGD5Q53EQ6 642 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 ZNF598Q86UK7 904 aaKnown RBP12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 CASD1Q96PB1 797 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 MMTAG2Q9BU76 263 aaKnown RBP12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 C17orf75Q9HAS0 396 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 PRMT7Q9NVM4 692 aaPredicted RBP12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 KCND2Q9NZV8 630 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
TRBV5-5-201ENST00000390372 CNTNAP2Q9UHC6 1331 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 CHD9Q3L8U1 2897 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 SSBP05455 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 HOXA11P31270 313 aaPredicted RBP12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 PPM1AP35813 382 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 TXLNAP40222 546 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 MAPK6Q16659 721 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 APBB1IPQ7Z5R6 666 aaPredicted RBP12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 SYT2Q8N9I0 419 aaPredicted RBP12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 URGCPQ8TCY9 931 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 ZNF558Q96NG5 402 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 THEGQ9P2T0 379 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 PUF60Q9UHX1 559 aaKnown RBP12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 COG5Q9UP83 839 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
TRBV5-5-201ENST00000390372 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 NCK2O43639 380 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 ITGA4P13612 1032 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 CEBPZQ03701 1054 aaKnown RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 KRT17Q04695 432 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 UBE3AQ05086 875 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 RNASELQ05823 741 aaKnown RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 PRPF4BQ13523 1007 aaKnown RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 FAM187BQ17R55 369 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 CLLU1OSQ5K130 101 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 CDCA2Q69YH5 1023 aaPredicted RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 RINT1Q6NUQ1 792 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 SLC27A1Q6PCB7 646 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 MRPL10Q7Z7H8 261 aaKnown RBP12.11□□□□□ -0.47
TRBV5-5-201ENST00000390372 KLHL23Q8NBE8 558 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms