RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 GCLCP48506 637 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CLK2P49760 499 aaKnown RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 PLTPP55058 493 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ROR2Q01974 943 aaKnown RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ARID5AQ03989 594 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 RNASELQ05823 741 aaKnown RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CALCOCO2Q13137 446 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MYBPC2Q14324 1141 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MTFR1Q15390 333 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 TAF11Q15544 211 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 FAM133BQ5BKY9 247 aaKnown RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 C16orf86Q6ZW13 317 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ZNF398Q8TD17 642 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MICAL1Q8TDZ2 1067 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 U2AF1L4Q8WU68 220 aaKnown RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 DTNBP1Q96EV8 351 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MBOAT7Q96N66 472 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 CCDC77Q9BR77 488 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 TRIM51Q9BSJ1 452 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 VCXQ9H320 206 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
PTPRR-203ENST00000378778 PCDHA12Q9UN75 941 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MINPP1Q9UNW1 487 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 STARD13Q9Y3M8 1113 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 PCDHA3Q9Y5H8 950 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SPATA31A1Q5TZJ5 1347 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 MROH7Q68CQ1 1323 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 ADGRA3Q8IWK6 1321 aa8.84□□□□□ -0.99
PTPRR-203ENST00000378778 SNAP23O00161 211 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 CYP2D6P10635 497 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 ALDH3A1P30838 453 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 YARSP54577 528 aaKnown RBP8.84□□□□□ -1
PTPRR-203ENST00000378778 KCNJ2P63252 427 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 KIF22Q14807 665 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 SLC15A2Q16348 729 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 SLC30A9Q6PML9 568 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 BARGINQ6ZT62 677 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 GPBP1Q86WP2 473 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 DZIP1Q86YF9 867 aaKnown RBP8.84□□□□□ -1
PTPRR-203ENST00000378778 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.84□□□□□ -1
PTPRR-203ENST00000378778 LARGE2Q8N3Y3 721 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 RBM46Q8TBY0 533 aaKnown RBP8.84□□□□□ -1
PTPRR-203ENST00000378778 FBXO25Q8TCJ0 367 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 C7orf43Q8WVR3 580 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 TRAPPC9Q96Q05 1148 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 CDK5RAP2Q96SN8 1893 aa8.84□□□□□ -1
PTPRR-203ENST00000378778 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -1
PTPRR-203ENST00000378778 FRMPD4Q14CM0 1322 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 MYO3BQ8WXR4 1341 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 ARFGEF1Q9Y6D6 1849 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SLC9A1P19634 815 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
PTPRR-203ENST00000378778 EXOC3L1Q86VI1 746 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 ANKRD35Q8N283 1001 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 GRK7Q8WTQ7 553 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 STK32AQ8WU08 396 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 FAM210AQ96ND0 272 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 DHX36Q9H2U1 1008 aaKnown RBP8.83□□□□□ -1
PTPRR-203ENST00000378778 LRRC19Q9H756 370 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 NKIRAS1Q9NYS0 192 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SENP1Q9P0U3 644 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
PTPRR-203ENST00000378778 USH1CQ9Y6N9 552 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 LOXHD1Q8IVV2 1947 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SNED1Q8TER0 1413 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 FOCADQ5VW36 1801 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 PNMA6FA0A0J9YX94 578 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 TLDC2A0PJX2 215 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 TCP11X1B4DZS4 312 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 PDLIM1O00151 329 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SLC37A4O43826 429 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 KRT16P08779 473 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 USP17L8P0C7I0 530 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SNHG28P0DPA3 235 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 TNFAIP3P21580 790 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SLC12A3P55017 1021 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 EVA1CP58658 441 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 IFI35P80217 286 aaPredicted RBP8.83□□□□□ -1
PTPRR-203ENST00000378778 IL9RQ01113 521 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 IRGCQ6NXR0 463 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 STXBP4Q6ZWJ1 553 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 INTS8Q75QN2 995 aaKnown RBP8.83□□□□□ -1
PTPRR-203ENST00000378778 KCNK18Q7Z418 384 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 TMEM174Q8WUU8 243 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 ARHGEF2Q92974 986 aaKnown RBP8.83□□□□□ -1
PTPRR-203ENST00000378778 SLC35C1Q96A29 364 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 BICD1Q96G01 975 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 ZSWIM1Q9BR11 485 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 TLE6Q9H808 572 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SAR1AQ9NR31 198 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 OLFML3Q9NRN5 406 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 CYP39A1Q9NYL5 469 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 GCNT4Q9P109 453 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 SNX24Q9Y343 169 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 L3MBTL1Q9Y468 752 aa8.83□□□□□ -1
PTPRR-203ENST00000378778 POTEMA6NI47 508 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 MAPK13O15264 365 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 P4HA2O15460 535 aa8.82□□□□□ -1
PTPRR-203ENST00000378778 MARCH6O60337 910 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms