RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 FAM114A2Q9NRY5 505 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 RBAK-RBAKDNI3L0D1 243 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 THAP12O43422 761 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 SPATA31C1P0DKV0 1188 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ARP10275 920 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ALAS1P13196 640 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ATF7P17544 494 aaPredicted RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 LMNB1P20700 586 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 SCTRP47872 440 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 EPHA7Q15375 998 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ZNF394Q53GI3 561 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ZNF449Q6P9G9 518 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 FRMD5Q7Z6J6 570 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 RFFLQ8WZ73 363 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ZNF668Q96K58 619 aaPredicted RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ALG13Q9NP73 1137 aaKnown RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 TRIM33Q9UPN9 1127 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 NUP98P52948 1817 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 PI4K2BG5E9Z4 385 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 MEIS2O14770 477 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 HIP1RO75146 1068 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 NEBLO76041 1014 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 GJB6O95452 261 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 EIF2AK2P19525 551 aaKnown RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 STX2P32856 288 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 HOXD13P35453 343 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 NPEPPSP55786 919 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 SMAD1Q15797 465 aaKnown RBP12.45□□□□□ -0.42
SEC23B-204ENST00000377475 SGO2Q562F6 1265 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 NCAPGQ9BPX3 1015 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ERP44Q9BS26 406 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 LXNQ9BS40 222 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 MTUS1Q9ULD2 1270 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 ASTN1O14525 1302 aa12.45□□□□□ -0.42
SEC23B-204ENST00000377475 BCRP11274 1271 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ARHGEF19Q8IW93 802 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 TRIM7Q9C029 511 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 COG5Q9UP83 839 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ESYT2A0FGR8 921 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ANKRD63C9JTQ0 380 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 CCDC188H7C350 402 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 PDXKO00764 312 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 CHUKO15111 745 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 RAD17O75943 681 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 PYGMP11217 842 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 RPA1P27694 616 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 RPL21P46778 160 aaKnown RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 DGKZQ13574 1117 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 SEPT7Q16181 437 aaKnown RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 PHLDB3Q6NSJ2 640 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 MIER3Q7Z3K6 550 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 MSL3Q8N5Y2 521 aaKnown RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 SYT2Q8N9I0 419 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 MICAL1Q8TDZ2 1067 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 CPA5Q8WXQ8 436 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 NUP85Q9BW27 656 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ABCF3Q9NUQ8 709 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 DYNLT1P63172 113 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 TMED2Q15363 201 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ZNF662Q6ZS27 426 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ARHGEF2Q92974 986 aaKnown RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ZKSCAN4Q969J2 545 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 TPX2Q9ULW0 747 aaKnown RBP12.44□□□□□ -0.42
SEC23B-204ENST00000377475 LRP6O75581 1613 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
SEC23B-204ENST00000377475 ALS2Q96Q42 1657 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 TGFB1I1O43294 461 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 LCA5LO95447 670 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 SCFD2Q8WU76 684 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 LRRC4BQ9NT99 713 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 ANAPC7Q9UJX3 599 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 KRT15P19012 456 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 MXI1P50539 228 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 EDRF1Q3B7T1 1238 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 XKR9Q5GH70 373 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 VSIG1Q86XK7 387 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 AGPAT1Q99943 283 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 VCPKMTQ9H867 229 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 AGPAT3Q9NRZ7 376 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 SWAP70Q9UH65 585 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 COL18A1P39060 1754 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 CHD4Q14839 1912 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 TRAPPC3O43617 180 aa12.43□□□□□ -0.42
SEC23B-204ENST00000377475 SEZ6Q53EL9 994 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms