RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.29
VPS13A-204ENST00000376634 ATP11BQ9Y2G3 1177 aa13.25□□□□□ -0.29
VPS13A-204ENST00000376634 IL10P22301 178 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 MAGEA9P43362 315 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
VPS13A-204ENST00000376634 TBC1D9BQ66K14 1250 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 FAM167AQ96KS9 214 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 PI4KBQ9UBF8 816 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 C5orf58C9J3I9 102 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 HUS1O60921 280 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 TBXAS1P24557 533 aaPredicted RBP13.24□□□□□ -0.29
VPS13A-204ENST00000376634 S100A5P33763 92 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 SPDYE7PQ495Y7 208 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 GRAMD1CQ8IYS0 662 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ASIC4Q96FT7 647 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 DYRK4Q9NR20 520 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 CASP8Q14790 479 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 LDHAP00338 332 aaKnown RBP13.24□□□□□ -0.29
VPS13A-204ENST00000376634 MAP4P27816 1152 aaKnown RBP13.24□□□□□ -0.29
VPS13A-204ENST00000376634 PHKA1P46020 1223 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ROR1Q01973 937 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 EFHBQ8N7U6 833 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 NDFIP2Q9NV92 336 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 STOML1Q9UBI4 398 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ATP10AO60312 1499 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 TCOF1Q13428 1488 aaKnown RBP13.24□□□□□ -0.29
VPS13A-204ENST00000376634 HOXA13P31271 388 aaPredicted RBP13.24□□□□□ -0.29
VPS13A-204ENST00000376634 TET3O43151 1660 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 SLC16A2P36021 539 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 LRRC8EQ6NSJ5 796 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 KIF2CQ99661 725 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 PCDHGB4Q9UN71 923 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 UBE4BO95155 1302 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 hCG_2014768A0A024R1R8 64 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 CFAP69A5D8W1 941 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ASAP2O43150 1006 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 PALMO75781 387 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 TEX2Q8IWB9 1127 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 PROM2Q8N271 834 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF711Q9Y462 761 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 TTC23LQ6PF05 361 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 VSTM4Q8IW00 320 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF280CQ8ND82 737 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
VPS13A-204ENST00000376634 HMGB3O15347 200 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 ACCSLQ4AC99 568 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 CEP55Q53EZ4 464 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 FASTKD1Q53R41 847 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 KRT7P08729 469 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 NR5A1Q13285 461 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 CCDC188H7C350 402 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 DFFAO00273 331 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 CLDN3O15551 220 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 RANBP1P43487 201 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 PRAMEP78395 509 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 HIF1AQ16665 826 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 SH3GL3Q99963 347 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 PDE8BO95263 885 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 HEATR6Q6AI08 1181 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 RNF135Q8IUD6 432 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 PIDD1Q9HB75 910 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 KIF1CO43896 1103 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 GREM2Q9H772 168 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 AIPL1Q9NZN9 384 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 MYCP01106 439 aaPredicted RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 SSH3Q8TE77 659 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 ADNPQ9H2P0 1102 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 TSR3Q9UJK0 312 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 HSPA2P54652 639 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 MAPRE2Q15555 327 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 TMEM270Q6UE05 265 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 TAS2R42Q7RTR8 314 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 SCFD1Q8WVM8 642 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 AFF4Q9UHB7 1163 aaKnown RBP13.23□□□□□ -0.29
VPS13A-204ENST00000376634 STAP1Q9ULZ2 295 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 NBNO60934 754 aa13.23□□□□□ -0.29
VPS13A-204ENST00000376634 PLD3Q8IV08 490 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 PCDHB8Q9UN66 801 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 ANGPT2O15123 496 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 HNRNPRO43390 633 aaKnown RBP13.22□□□□□ -0.29
VPS13A-204ENST00000376634 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 ARHGAP18Q8N392 663 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 DTNBP1Q96EV8 351 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 THOC1Q96FV9 657 aaKnown RBP13.22□□□□□ -0.29
VPS13A-204ENST00000376634 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
VPS13A-204ENST00000376634 VPS11Q9H270 941 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
VPS13A-204ENST00000376634 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 BEST2Q8NFU1 509 aa13.22□□□□□ -0.29
VPS13A-204ENST00000376634 KRT31Q15323 416 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms