RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ZNF623O75123 536 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLCN6-204ENST00000376491 OFD1O75665 1012 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 CXCL14O95715 111 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 GALTP07902 379 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 QARSP47897 775 aaKnown RBP16.75■□□□□ 0.27
CLCN6-204ENST00000376491 SCRN1Q12765 414 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
CLCN6-204ENST00000376491 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 FBXL6Q8N531 539 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 TMEM169Q96HH4 297 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 IGSF21Q96ID5 467 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 PHOX2BQ99453 314 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 ADAM7Q9H2U9 754 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 POMKQ9H5K3 350 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 INPP5FQ9Y2H2 1132 aa16.75■□□□□ 0.27
CLCN6-204ENST00000376491 WEE2P0C1S8 567 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 SKIP12755 728 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 VCPP55072 806 aaKnown RBP16.74■□□□□ 0.27
CLCN6-204ENST00000376491 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 NOMO2Q5JPE7 1267 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 EARS2Q5JPH6 523 aaKnown RBP16.74■□□□□ 0.27
CLCN6-204ENST00000376491 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 AGMOQ6ZNB7 445 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 DDX53Q86TM3 631 aaKnown RBP16.74■□□□□ 0.27
CLCN6-204ENST00000376491 C12orf76Q8N812 135 aaPredicted RBP16.74■□□□□ 0.27
CLCN6-204ENST00000376491 FEZF2Q8TBJ5 459 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 HAS1Q92839 578 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 VN1R3Q9BXE9 311 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 DHX33Q9H6R0 707 aaKnown RBP16.74■□□□□ 0.27
CLCN6-204ENST00000376491 MINDY3Q9H8M7 445 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 DNAJB4Q9UDY4 337 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 IRAK3Q9Y616 596 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
CLCN6-204ENST00000376491 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.73■□□□□ 0.27
CLCN6-204ENST00000376491 CCDC194A0A1B0GVG4 234 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 C2CD4DB7Z1M9 353 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 P4HBP07237 508 aaKnown RBP16.73■□□□□ 0.27
CLCN6-204ENST00000376491 CTSAP10619 480 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 CA8P35219 290 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 SLC11A1P49279 550 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 RAB27AP51159 221 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 AFF1P51825 1210 aaKnown RBP16.73■□□□□ 0.27
CLCN6-204ENST00000376491 ITIH3Q06033 890 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 TCF15Q12870 199 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 GLB1LQ6UWU2 654 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 ZNF280BQ86YH2 543 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 SUGP1Q8IWZ8 645 aaKnown RBP16.73■□□□□ 0.27
CLCN6-204ENST00000376491 SLC22A17Q8WUG5 538 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 RSPH1Q8WYR4 309 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 TMEM143Q96AN5 459 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 CEP170P1Q96L14 293 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 JPH2Q9BR39 696 aaPredicted RBP16.73■□□□□ 0.27
CLCN6-204ENST00000376491 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 PCDHB2Q9Y5E7 798 aa16.73■□□□□ 0.27
CLCN6-204ENST00000376491 DDHD2O94830 711 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 EPCAMP16422 314 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 HOXA11P31270 313 aaPredicted RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 UBXN11Q5T124 520 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 RARS2Q5T160 578 aaKnown RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 CES5AQ6NT32 575 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 PIK3AP1Q6ZUJ8 805 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 C4orf19Q8IY42 314 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 PRPF31Q8WWY3 499 aaKnown RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 NECTIN4Q96NY8 510 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 GBP3Q9H0R5 595 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
CLCN6-204ENST00000376491 RGL1Q9NZL6 768 aa16.72■□□□□ 0.27
CLCN6-204ENST00000376491 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 ZBTB39O15060 712 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 TBX3O15119 743 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 CCNT1O60563 726 aaKnown RBP16.71■□□□□ 0.27
CLCN6-204ENST00000376491 DKC1O60832 514 aaKnown RBP eCLIP16.71■□□□□ 0.276e-6■■■□□ 15
CLCN6-204ENST00000376491 SRGAP2CP0DJJ0 459 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 RNASELQ05823 741 aaKnown RBP16.71■□□□□ 0.27
CLCN6-204ENST00000376491 SPIRE1Q08AE8 756 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
CLCN6-204ENST00000376491 EPHA7Q15375 998 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 MRPL10Q7Z7H8 261 aaKnown RBP16.71■□□□□ 0.27
CLCN6-204ENST00000376491 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 KREMEN2Q8NCW0 462 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 SLC7A3Q8WY07 619 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 LXNQ9BS40 222 aa16.71■□□□□ 0.27
CLCN6-204ENST00000376491 NR2E1Q9Y466 385 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms