RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 STAT1P42224 750 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSH5-202ENST00000375740 HMGCS2P54868 508 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 PSMC5P62195 406 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 CCDC181Q5TID7 509 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 ALKBH5Q6P6C2 394 aaKnown RBP15.18■□□□□ 0.02
MSH5-202ENST00000375740 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
MSH5-202ENST00000375740 CNPY4Q8N129 248 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
MSH5-202ENST00000375740 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 FAM107BQ9H098 131 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 TMEM206Q9H813 350 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 DNAJC12Q9UKB3 198 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 PCDHGC5Q9Y5F6 944 aa15.18■□□□□ 0.02
MSH5-202ENST00000375740 GOLGA6BA6NDN3 693 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 CLGNO14967 610 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 IBSPP21815 317 aaPredicted RBP15.17■□□□□ 0.02
MSH5-202ENST00000375740 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 FNTAP49354 379 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 ITIH3Q06033 890 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 BFSP1Q12934 665 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 MYBPC2Q14324 1141 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 SNRNP48Q6IEG0 339 aaKnown RBP15.17■□□□□ 0.02
MSH5-202ENST00000375740 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 REPS2Q8NFH8 660 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 LRRC1Q9BTT6 524 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 GPRC5CQ9NQ84 441 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 WDR64B1ANS9 1081 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 FERP16591 822 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 JAK3P52333 1124 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 NPEPPSP55786 919 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 PPFIA1Q13136 1202 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 XKR9Q5GH70 373 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 MEI1Q5TIA1 1274 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 PLA2G4FQ68DD2 849 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 HAUS6Q7Z4H7 955 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 STK33Q9BYT3 514 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 INTS2Q9H0H0 1204 aaKnown RBP15.17■□□□□ 0.02
MSH5-202ENST00000375740 TCEAL9Q9UHQ7 104 aa15.17■□□□□ 0.02
MSH5-202ENST00000375740 GRID2IPA4D2P6 1211 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 DDX3XO00571 662 aaKnown RBP eCLIP15.16■□□□□ 0.027e-9■■□□□ 12.6
MSH5-202ENST00000375740 NR3C2P08235 984 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 SFNP31947 248 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 DSG3P32926 999 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 SOX5P35711 763 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 DNA2P51530 1060 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 DLG4P78352 724 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 KRT76Q01546 638 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 ALCAMQ13740 583 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 DRAP1Q14919 205 aaPredicted RBP15.16■□□□□ 0.02
MSH5-202ENST00000375740 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 ARL8AQ96BM9 186 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 NENFQ9UMX5 172 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 PACSIN2Q9UNF0 486 aaPredicted RBP15.16■□□□□ 0.02
MSH5-202ENST00000375740 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
MSH5-202ENST00000375740 SLC16A4O15374 487 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 EVI5O60447 810 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 SCP2P22307 547 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 CCND2P30279 289 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 PEX3P56589 373 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 MYL7Q01449 175 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 VPS36Q86VN1 386 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 CBWD1Q9BRT8 395 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 ADAMTS5Q9UNA0 930 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 RLFQ13129 1914 aa15.16■□□□□ 0.02
MSH5-202ENST00000375740 F8VZ95 297 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 KRT13P13646 458 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 ANXA13P27216 316 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 GTF2BQ00403 316 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 PDCLQ13371 301 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 FAM102BQ5T8I3 360 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 CCDC70Q6NSX1 233 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 TRPM4Q8TD43 1214 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 ANKEF1Q9NU02 776 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
MSH5-202ENST00000375740 TMEM132BQ14DG7 1078 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 CFAP221Q4G0U5 840 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 XRRA1Q6P2D8 792 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 SND1Q7KZF4 910 aaKnown RBP eCLIP15.15■□□□□ 0.02
MSH5-202ENST00000375740 NLRX1Q86UT6 975 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 APOBEC3FQ8IUX4 373 aaKnown RBP15.15■□□□□ 0.02
MSH5-202ENST00000375740 ZSWIM2Q8NEG5 633 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 U2AF1L4Q8WU68 220 aaKnown RBP15.15■□□□□ 0.02
MSH5-202ENST00000375740 C12orf42Q96LP6 360 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 SH3GL2Q99962 352 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 MOV10L1Q9BXT6 1211 aaKnown RBP15.15■□□□□ 0.02
MSH5-202ENST00000375740 GPR88Q9GZN0 384 aa15.15■□□□□ 0.02
MSH5-202ENST00000375740 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 H2AFZP0C0S5 128 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 VAMP7P51809 220 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 PHLDB3Q6NSJ2 640 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 H2AFVQ71UI9 128 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 ANO5Q75V66 913 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 LMO3Q8TAP4 145 aa15.14■□□□□ 0.01
MSH5-202ENST00000375740 LNX1Q8TBB1 728 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms