RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 RASSF2P50749 326 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 SYCP2LQ5T4T6 812 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 PRUNE1Q86TP1 453 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 SCFD1Q8WVM8 642 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 DDX50Q9BQ39 737 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 BATF3Q9NR55 127 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 ZFATQ9P243 1243 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 ANAPC5Q9UJX4 755 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 PARP4Q9UKK3 1724 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 CCDC189A1A4V9 331 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 AKAP3O75969 853 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 RFC5P40937 340 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 BTDP43251 543 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 NCALDP61601 193 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 PSMC6P62333 389 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF662Q6ZS27 426 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 ACTRT1Q8TDG2 376 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 SNX3O60493 162 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 OPHN1O60890 802 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 EPHB2P29323 1055 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 HNRNPH3P31942 346 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 IL9RQ01113 521 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 EPM2AIP1Q7L775 607 aaPredicted RBP11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 P3H4Q92791 437 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF653Q96CK0 615 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF570Q96NI8 536 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
PRPF38B-201ENST00000370021 LDHCP07864 332 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ATF2P15336 505 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ATP5DP30049 168 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 GCLMP48507 274 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 NT5DC3Q86UY8 548 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 PDCD7Q8N8D1 485 aaKnown RBP11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 CFAP61Q8NHU2 1237 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 TTC1Q99614 292 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 SH3GLB2Q9NR46 395 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 KLHL11Q9NVR0 708 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 AGTP01019 485 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 LMNB1P20700 586 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 COMTP21964 271 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 KNOP1Q1ED39 458 aaKnown RBP11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 TRIM59Q8IWR1 403 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 PROM2Q8N271 834 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 FITM2Q8N6M3 262 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF483Q8TF39 744 aaPredicted RBP11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 RMDN2Q96LZ7 410 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 NPHS2Q9NP85 383 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 SLCO1B3Q9NPD5 702 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 EXOC1LA0A1B0GW35 172 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 DPPA5A6NC42 116 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 H0YGN5 161 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 TNFRSF8P28908 595 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 SLC8A3P57103 927 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 KRT17Q04695 432 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 MAPK7Q13164 816 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ARHGEF18Q6ZSZ5 1173 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 SLC20A1Q8WUM9 679 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 RFFLQ8WZ73 363 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ALG3Q92685 438 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 PARP2Q9UGN5 583 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 SCOCQ9UIL1 159 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 NFS1Q9Y697 457 aa11.18□□□□□ -0.62
PRPF38B-201ENST00000370021 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 TCRBV7S2A1N4TA0A589 114 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 PPFIA2O75334 1257 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 CALCAP01258 141 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 SLMAPQ14BN4 828 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 ODR4Q5SWX8 454 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 RNF220Q5VTB9 566 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 CPNE8Q86YQ8 564 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 FAM178BQ8IXR5 827 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 TTC8Q8TAM2 541 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 RBM46Q8TBY0 533 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 SETDB2Q96T68 719 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 CDC42EP4Q9H3Q1 356 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 ANAPC4Q9UJX5 808 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 FLT1P17948 1338 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 GAS8O95995 478 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 ASTE1Q2TB18 679 aaPredicted RBP11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 FAM182AQ5T1J6 154 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 DAB2IPQ5VWQ8 1189 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
PRPF38B-201ENST00000370021 EXOC3L1Q86VI1 746 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms