RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 UNC13DQ70J99 1090 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 SESTD1Q86VW0 696 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CATSPER3Q86XQ3 398 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 DHX40Q8IX18 779 aaKnown RBP9.75□□□□□ -0.85
SNX27-201ENST00000368838 SMAP1Q8IYB5 467 aaPredicted RBP9.75□□□□□ -0.85
SNX27-201ENST00000368838 TTC13Q8NBP0 860 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 PPTC7Q8NI37 304 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CYP2W1Q8TAV3 490 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CAGE1Q8TC20 777 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 GDPD5Q8WTR4 605 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 MRFAP1L1Q96HT8 127 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 CDK5RAP3Q96JB5 506 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 UHRF1Q96T88 793 aaPredicted RBP9.75□□□□□ -0.85
SNX27-201ENST00000368838 ZNF577Q9BSK1 485 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 OSBPL7Q9BZF2 842 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 DNAJC25Q9H1X3 360 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 MLXIPQ9HAP2 919 aa9.75□□□□□ -0.85
SNX27-201ENST00000368838 LRRC10BA6NIK2 292 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 PP2D1A8MPX8 630 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 PPP1R3GB7ZBB8 358 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 GOLGA6L19H0YKK7 550 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 HAS3O00219 553 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 GAS7O60861 476 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 SLITRK3O94933 977 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 EYA4O95677 639 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 OATP04181 439 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 RPN1P04843 607 aaKnown RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 CTSHP09668 335 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 CDC25AP30304 524 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 CDC25BP30305 580 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 THPOP40225 353 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 TPM4P67936 248 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 MYL5Q02045 173 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 TRIM71Q2Q1W2 868 aaKnown RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 CNKSR3Q6P9H4 555 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 C11orf57Q6ZUT1 292 aaPredicted RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 C4orf19Q8IY42 314 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 PHOSPHO2Q8TCD6 241 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 LRRC15Q8TF66 581 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 TMEM174Q8WUU8 243 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 DNAJC19Q96DA6 116 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 DHTKD1Q96HY7 919 aaPredicted RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 NACC1Q96RE7 527 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 TIPINQ9BVW5 301 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 DBR1Q9UK59 544 aaKnown RBP9.74□□□□□ -0.85
SNX27-201ENST00000368838 DNM3Q9UQ16 869 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
SNX27-201ENST00000368838 BECN2A8MW95 431 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 TREHO43280 583 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 LPXNO60711 386 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 PPFIA4O75335 1185 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 BAIAP3O94812 1187 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 ATG7O95352 703 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 LGALS2P05162 132 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 P4HBP07237 508 aaKnown RBP9.73□□□□□ -0.85
SNX27-201ENST00000368838 SMIM10L2AP0DMW4 78 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 SMIM10L2BP0DMW5 78 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 ARP10275 920 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 ZNF18P17022 549 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 SCP2P22307 547 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 CCT6AP40227 531 aaKnown RBP9.73□□□□□ -0.85
SNX27-201ENST00000368838 SLC12A3P55017 1021 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 PTK7Q13308 1070 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 ADSSL1Q8N142 457 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 GUF1Q8N442 669 aaKnown RBP9.73□□□□□ -0.85
SNX27-201ENST00000368838 EIF2AK1Q9BQI3 630 aaKnown RBP9.73□□□□□ -0.85
SNX27-201ENST00000368838 C16orf70Q9BSU1 422 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 KATNAL1Q9BW62 490 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 PANK2Q9BZ23 570 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 ZSWIM4Q9H7M6 989 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 OLFML3Q9NRN5 406 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 PKD2L1Q9P0L9 805 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 RWDD2AQ9UIY3 292 aa9.73□□□□□ -0.85
SNX27-201ENST00000368838 WDR64B1ANS9 1081 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 H3BRB1 525 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 NOP56O00567 594 aaKnown RBP9.72□□□□□ -0.85
SNX27-201ENST00000368838 MED24O75448 989 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 LGR5O75473 907 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 UPP2O95045 317 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 KIF20AO95235 890 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 CXCL10P02778 98 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 PLA2G4BP0C869 781 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 MAPTP10636 758 aaKnown RBP9.72□□□□□ -0.85
SNX27-201ENST00000368838 BMP1P13497 986 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 KCNA2P16389 499 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 COL9A1P20849 921 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 GUCY2CP25092 1073 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 AFMP43652 599 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 ZNF131P52739 623 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 IKBKEQ14164 716 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 ECM1Q16610 540 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 SPATA1Q5VX52 437 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 LUZP1Q86V48 1076 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 MYOCDQ8IZQ8 938 aa9.72□□□□□ -0.85
SNX27-201ENST00000368838 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms