RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SERPING1P05155 500 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 MYBP10242 640 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 ACLYP53396 1101 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 TNNC1P63316 161 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 FAAP100Q0VG06 881 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 STK4Q13043 487 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 INF2Q27J81 1249 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 CFAP58Q5T655 872 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 PPP4R3AQ6IN85 833 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 TYW1BQ6NUM6 668 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 TAX1BP1Q86VP1 789 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
USF1-201ENST00000368019 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
USF1-201ENST00000368019 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
USF1-201ENST00000368019 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
USF1-201ENST00000368019 SLC38A10Q9HBR0 1119 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 PCDHGC5Q9Y5F6 944 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 MYH10P35580 1976 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 VCANP13611 3396 aa12.57□□□□□ -0.4
USF1-201ENST00000368019 PLIN4Q96Q06 1357 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 ADCY6O43306 1168 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 DUSP11O75319 330 aaKnown RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 CST5P28325 142 aaPredicted RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 HSPA9P38646 679 aaKnown RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 PDIA5Q14554 519 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 NAB2Q15742 525 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 IFI16Q16666 785 aaKnown RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 TTMPQ5BVD1 217 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 SPDYCQ5MJ68 293 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 LRRC55Q6ZSA7 311 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 CCDC91Q7Z6B0 441 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 ZC3H3Q8IXZ2 948 aaKnown RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 GSPT2Q8IYD1 628 aaKnown RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 GMCL1P1Q8NEA9 526 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 LRRC15Q8TF66 581 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 CALR3Q96L12 384 aaKnown RBP12.56□□□□□ -0.4
USF1-201ENST00000368019 ZIM3Q96PE6 472 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 EPN3Q9H201 632 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 FEM1BQ9UK73 627 aa12.56□□□□□ -0.4
USF1-201ENST00000368019 MYADML2A6NDP7 307 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 MOXD2PA6NHM9 499 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 PP2D1A8MPX8 630 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 MEFVO15553 781 aaPredicted RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 PQBP1O60828 265 aaKnown RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 ZBED4O75132 1171 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 KIAA0754O94854 1291 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 NOVP48745 357 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 KLK7P49862 253 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 CDK7P50613 346 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 OAZ1P54368 228 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 NKX3-2P78367 333 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 TFAP4Q01664 338 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 CUL1Q13616 776 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 KCNA10Q16322 511 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 TMEM266Q2M3C6 531 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 HGSNATQ68CP4 663 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 PPP1R18Q6NYC8 613 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 CPXCR1Q8N123 301 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 TSEN2Q8NCE0 465 aaKnown RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 CHST13Q8NET6 341 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 LARP4BQ92615 738 aaKnown RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 P3H4Q92791 437 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
USF1-201ENST00000368019 PBKQ96KB5 322 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 ATP6V1G3Q96LB4 118 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 NCAPGQ9BPX3 1015 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 MMTAG2Q9BU76 263 aaKnown RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 KATNBL1Q9H079 304 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 UPF3AQ9H1J1 476 aaKnown RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 RAVER2Q9HCJ3 691 aaKnown RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 STARD7Q9NQZ5 370 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 IL17RBQ9NRM6 502 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
USF1-201ENST00000368019 TMEM59LQ9UK28 342 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 TBX21Q9UL17 535 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 TFR2Q9UP52 801 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 DUSP10Q9Y6W6 482 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 TTC28Q96AY4 2481 aa12.55□□□□□ -0.4
USF1-201ENST00000368019 LCTP09848 1927 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 TMEM265A0A087WTH1 108 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 CCDC188H7C350 402 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 NDUFAB1O14561 156 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 CYTH3O43739 400 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 NMT2O60551 498 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 ZMYND10O75800 440 aa12.54□□□□□ -0.4
USF1-201ENST00000368019 TTLL1O95922 423 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms