RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 NECAB3Q96P71 396 aaPredicted RBP18.82■□□□□ 0.6
PRKN-202ENST00000366892 MINDY3Q9H8M7 445 aa18.82■□□□□ 0.6
PRKN-202ENST00000366892 PIN4Q9Y237 131 aaKnown RBP18.82■□□□□ 0.6
PRKN-202ENST00000366892 TNFRSF10AO00220 468 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 DGAT1O75907 488 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 CSPG5O95196 566 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 ATF7P17544 494 aaPredicted RBP18.81■□□□□ 0.6
PRKN-202ENST00000366892 PDCP20941 246 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 PHKA2P46019 1235 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 RARRES1P49788 294 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 COL19A1Q14993 1142 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 CLLU1OSQ5K130 101 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 TWF2Q6IBS0 349 aaKnown RBP18.81■□□□□ 0.6
PRKN-202ENST00000366892 SRGAP1Q7Z6B7 1085 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 ABI1Q8IZP0 508 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 C4orf32Q8N8J7 132 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 RNF149Q8NC42 400 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 POF1BQ8WVV4 589 aa18.81■□□□□ 0.6
PRKN-202ENST00000366892 PABPC5Q96DU9 382 aaKnown RBP18.81■□□□□ 0.6
PRKN-202ENST00000366892 NOL7Q9UMY1 257 aaKnown RBP18.81■□□□□ 0.6
PRKN-202ENST00000366892 FNDC1Q4ZHG4 1894 aaPredicted RBP18.81■□□□□ 0.6
PRKN-202ENST00000366892 TCF20Q9UGU0 1960 aaKnown RBP18.8■□□□□ 0.6
PRKN-202ENST00000366892 MED24O75448 989 aa18.8■□□□□ 0.6
PRKN-202ENST00000366892 TOB1P50616 345 aaPredicted RBP18.8■□□□□ 0.6
PRKN-202ENST00000366892 CSPP1Q1MSJ5 1256 aa18.8■□□□□ 0.6
PRKN-202ENST00000366892 LEXMQ3ZCV2 418 aa18.8■□□□□ 0.6
PRKN-202ENST00000366892 TUFT1Q9NNX1 390 aa18.8■□□□□ 0.6
PRKN-202ENST00000366892 LMBRD1Q9NUN5 540 aa18.8■□□□□ 0.6
PRKN-202ENST00000366892 NCK2O43639 380 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 FGF18O76093 207 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 IRS1P35568 1242 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 ARL2P36404 184 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 HYAL1Q12794 435 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 MXD4Q14582 209 aaPredicted RBP18.79■□□□□ 0.6
PRKN-202ENST00000366892 COLGALT1Q8NBJ5 622 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.79■□□□□ 0.6
PRKN-202ENST00000366892 HELQQ8TDG4 1101 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 POLR3CQ9BUI4 534 aaPredicted RBP18.79■□□□□ 0.6
PRKN-202ENST00000366892 AGPAT5Q9NUQ2 364 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 KIF3AQ9Y496 699 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 H3BQ06 376 aaPredicted RBP18.79■□□□□ 0.6
PRKN-202ENST00000366892 ZNF623O75123 536 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 LAG3P18627 525 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 HOXA11P31270 313 aaPredicted RBP18.79■□□□□ 0.6
PRKN-202ENST00000366892 UBE3AQ05086 875 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 PKP1Q13835 747 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 CTC1Q2NKJ3 1217 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 EP400NLQ6ZTU2 488 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 LRRC43Q8N309 656 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 TMEM87AQ8NBN3 555 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 CCDC43Q96MW1 224 aaKnown RBP18.79■□□□□ 0.6
PRKN-202ENST00000366892 NACC1Q96RE7 527 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 FAM105AQ9NUU6 356 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 CLDND1Q9NY35 253 aa18.79■□□□□ 0.6
PRKN-202ENST00000366892 SKIP12755 728 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 RPA1P27694 616 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 GJB2P29033 226 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRKN-202ENST00000366892 LTBRP36941 435 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 PTENP60484 403 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 LONRF3Q496Y0 759 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 KCNT2Q6UVM3 1135 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 THNSL1Q8IYQ7 743 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 ERMNQ8TAM6 284 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 ASAP3Q8TDY4 903 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 LPPQ93052 612 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 IGFLR1Q9H665 355 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 PCDHB6Q9Y5E3 794 aa18.78■□□□□ 0.6
PRKN-202ENST00000366892 KIAA1671Q9BY89 1806 aa18.77■□□□□ 0.6
PRKN-202ENST00000366892 ZSCAN22P10073 491 aaPredicted RBP18.77■□□□□ 0.6
PRKN-202ENST00000366892 FXR2P51116 673 aaKnown RBP eCLIP18.77■□□□□ 0.6
PRKN-202ENST00000366892 RAB27AP51159 221 aa18.77■□□□□ 0.6
PRKN-202ENST00000366892 POU5F1BQ06416 359 aa18.77■□□□□ 0.6
PRKN-202ENST00000366892 PTGDRQ13258 359 aa18.77■□□□□ 0.6
PRKN-202ENST00000366892 MICAL1Q8TDZ2 1067 aa18.77■□□□□ 0.6
PRKN-202ENST00000366892 SYAP1Q96A49 352 aaPredicted RBP18.77■□□□□ 0.6
PRKN-202ENST00000366892 DBR1Q9UK59 544 aaKnown RBP18.77■□□□□ 0.6
PRKN-202ENST00000366892 PCDHB2Q9Y5E7 798 aa18.77■□□□□ 0.6
PRKN-202ENST00000366892 C5orf42Q9H799 3197 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 MEIS3P2A8K0S8 358 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 STX6O43752 255 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 NCLP19338 710 aaKnown RBP18.76■□□□□ 0.59
PRKN-202ENST00000366892 GLRA2P23416 452 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 PBX3P40426 434 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 ZNF445P59923 1031 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 ERVFC1P60507 584 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 PLCB3Q01970 1234 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 DLX2Q07687 328 aaPredicted RBP18.76■□□□□ 0.59
PRKN-202ENST00000366892 CAPSQ13938 189 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 TFDP1Q14186 410 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 PDIA5Q14554 519 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 POTEGQ6S5H5 508 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 ADGRD2Q7Z7M1 963 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 IFNLR1Q8IU57 520 aaPredicted RBP18.76■□□□□ 0.59
PRKN-202ENST00000366892 TLR9Q9NR96 1032 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 PCDHGC5Q9Y5F6 944 aa18.76■□□□□ 0.59
PRKN-202ENST00000366892 GRXCR2A6NFK2 248 aa18.75■□□□□ 0.59
PRKN-202ENST00000366892 USO1O60763 962 aaKnown RBP18.75■□□□□ 0.59
PRKN-202ENST00000366892 ADAM15Q13444 863 aa18.75■□□□□ 0.59
PRKN-202ENST00000366892 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms