RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 PNKPQ96T60 521 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 C11orf70Q9BRQ4 267 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 ADPGKQ9BRR6 497 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 CAPS2Q9BXY5 557 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 PACSIN1Q9BY11 444 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 NSRP1Q9H0G5 558 aaKnown RBP3.95□□□□□ -1.78
USP33-201ENST00000357428 KCNMB3Q9NPA1 279 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 PPANQ9NQ55 473 aaKnown RBP3.95□□□□□ -1.78
USP33-201ENST00000357428 FBXO40Q9UH90 709 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 ANAPC7Q9UJX3 599 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 PPP1R9AQ9ULJ8 1098 aa3.95□□□□□ -1.78
USP33-201ENST00000357428 MYO5AQ9Y4I1 1855 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 LRRC10BA6NIK2 292 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 YDJCA8MPS7 323 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 E7EVH7 732 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 EPHB6O15197 1021 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 CLDN3O15551 220 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 VIMP08670 466 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 ACOT2P49753 483 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 YARSP54577 528 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 CCNA1P78396 465 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 DR1Q01658 176 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 DHX9Q08211 1270 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 KCNA1Q09470 495 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SNRNP35Q16560 246 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 FIGNQ5HY92 759 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 TMEM270Q6UE05 265 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 FAM83AQ86UY5 434 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SESTD1Q86VW0 696 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 IRF2BP1Q8IU81 584 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 TRIM59Q8IWR1 403 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 GPD1LQ8N335 351 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 OTUD6BQ8N6M0 293 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 MGARPQ8TDB4 240 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SYTL5Q8TDW5 730 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 MAIP1Q8WWC4 291 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ANKRD36BP1Q96IX9 119 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 AGPAT1Q99943 283 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 CBWD1Q9BRT8 395 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 NUP85Q9BW27 656 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 RBM12Q9NTZ6 932 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 KCND2Q9NZV8 630 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ABCA3Q99758 1704 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 HGSO14964 777 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 RGS16O15492 202 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 ATMINO43313 823 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 GGPS1O95749 300 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 TBC1D8O95759 1140 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 P4HA1P13674 534 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ATF2P15336 505 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 H2AFXP16104 143 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 GGCXP38435 758 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SLC12A3P55017 1021 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SOX10P56693 466 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 GPC5P78333 572 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ZNF568Q3ZCX4 644 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 MUM1L1Q5H9M0 696 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 MIIPQ5JXC2 388 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 EMBQ6PCB8 327 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 LRRC55Q6ZSA7 311 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 CCDC121Q6ZUS5 278 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 OTOP1Q7RTM1 612 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 TRAPPC11Q7Z392 1133 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 TMEM139Q8IV31 216 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ANKRD42Q8N9B4 389 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 FBXL13Q8NEE6 735 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ZNF564Q8TBZ8 553 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 ZNF507Q8TCN5 953 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 NLRP7Q8WX94 980 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 DNAJC19Q96DA6 116 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SLC10A4Q96EP9 437 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 TRIM11Q96F44 468 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 MED15Q96RN5 788 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 WDR18Q9BV38 432 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 MOV10L1Q9BXT6 1211 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 FGFBP2Q9BYJ0 223 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 STK33Q9BYT3 514 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 FAM114A2Q9NRY5 505 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 DNAJC17Q9NVM6 304 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 RBAKQ9NYW8 714 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 PARP2Q9UGN5 583 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 CHORDC1Q9UHD1 332 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 CCDC88AQ3V6T2 1871 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 COL16A1Q07092 1604 aaPredicted RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 TUBGCP6Q96RT7 1819 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 CHD4Q14839 1912 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 UBE4BO95155 1302 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 C19orf81C9J6K1 198 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 CCDC188H7C350 402 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 DGAT1O75907 488 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 SLITRK3O94933 977 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 ABL1P00519 1130 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 KRT1P04264 644 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 VIL1P09327 827 aaKnown RBP3.94□□□□□ -1.78
USP33-201ENST00000357428 ARHGAP25P42331 645 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 BACE1P56817 501 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 NEDD9Q14511 834 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 EMC2Q15006 297 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 NAB2Q15742 525 aa3.94□□□□□ -1.78
USP33-201ENST00000357428 Q3C1V9 767 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms