RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 FSCBQ5H9T9 825 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ARMC6Q6NXE6 501 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 APOA5Q6Q788 366 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 NEK9Q8TD19 979 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 DYNLL2Q96FJ2 89 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 USP28Q96RU2 1077 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SEC31BQ9NQW1 1179 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ABCC3O15438 1527 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 PI4K2BG5E9Z4 385 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 DHX9Q08211 1270 aaKnown RBP5.9□□□□□ -1.47
PTPRD-202ENST00000356435 C16orf72Q14CZ0 275 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 TCP11X2Q5H9J9 407 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 RASGRP4Q8TDF6 673 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 PGBD4Q96DM1 585 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CLIC6Q96NY7 704 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 KATNAL1Q9BW62 490 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 BRIP1Q9BX63 1249 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CASS4Q9NQ75 786 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SFMBT1Q9UHJ3 866 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 DLC1Q96QB1 1528 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CFLARO15519 480 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SFSWAPQ12872 951 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NR1H3Q13133 447 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 MED21Q13503 144 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 TRIP13Q15645 432 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ZC3H12BQ5HYM0 836 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 BANK1Q8NDB2 785 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 PYROXD1Q8WU10 500 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ZFP42Q96MM3 310 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 TJP2Q9UDY2 1190 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 TRIM33Q9UPN9 1127 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 UBXN8O00124 270 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 GH2P01242 217 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SLC39A14Q15043 492 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 CLEC4GQ6UXB4 293 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SUGP1Q8IWZ8 645 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ELOA2Q8IYF1 753 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 EAF2Q96CJ1 260 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 YIPF2Q9BWQ6 316 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NDEL1Q9GZM8 345 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ZFYVE28Q9HCC9 887 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ASAP1Q9ULH1 1129 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 TPX2Q9ULW0 747 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 CLIC4Q9Y696 253 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 GTPBP10A4D1E9 387 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ADD2P35612 726 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 PTH1RQ03431 593 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 CUL1Q13616 776 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NECTIN1Q15223 517 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 RHPN2Q8IUC4 686 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 TMEM35BQ8NCS4 154 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 OTUD5Q96G74 571 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SARS2Q9NP81 518 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ANLNQ9NQW6 1124 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 RNF146Q9NTX7 359 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 RAP1GDS1P52306 607 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 KLHL38Q2WGJ6 581 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ARHGAP15Q53QZ3 475 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 MFN1Q8IWA4 741 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 TAGAPQ8N103 731 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 RUBCNQ92622 972 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 UBXN6Q9BZV1 441 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NGRNQ9NPE2 291 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NDFIP2Q9NV92 336 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 GTSE1Q9NYZ3 720 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 AFF4Q9UHB7 1163 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 COL15A1P39059 1388 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 GOLGA8IPA6NC78 632 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 GOLGA8JA6NMD2 632 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L10C9JJH3 530 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 FDX1P10109 184 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 MAP4P27816 1152 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 PADI6Q6TGC4 694 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 LCA5Q86VQ0 697 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 CRLF3Q8IUI8 442 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SPATA2LQ8IUW3 424 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 PLEKHA5Q9HAU0 1116 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 CAPN11Q9UMQ6 739 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SASH1O94885 1247 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 PLCG1P19174 1290 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NDUFA8P51970 172 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 CYP27A1Q02318 531 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ZFYVE19Q96K21 471 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 HACL1Q9UJ83 578 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ZC3H4Q9UPT8 1303 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 DFFAO00273 331 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 EIF3BP55884 814 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 COPS2P61201 443 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ADCY1Q08828 1119 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SCRN1Q12765 414 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 SREBF2Q12772 1141 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ZKSCAN8Q15776 578 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ARL6IP4Q66PJ3 421 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 DDX56Q9NY93 547 aaKnown RBP5.89□□□□□ -1.47
PTPRD-202ENST00000356435 NCAPD2Q15021 1401 aa5.89□□□□□ -1.47
PTPRD-202ENST00000356435 ASAP2O43150 1006 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 EDC3Q96F86 508 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NDE1Q9NXR1 346 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms