RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 TGFB1I1O43294 461 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GAS2O43903 313 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 DGAT1O75907 488 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 RDXP35241 583 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 DRAP1Q14919 205 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 EZH2Q15910 746 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 SUPT20HL1Q3ZLR7 823 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 XKR9Q5GH70 373 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 WDR44Q5JSH3 913 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 KRT39Q6A163 491 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ZNF571Q7Z3V5 609 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 DAAM2Q86T65 1068 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 MAP4K3Q8IVH8 894 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 BANK1Q8NDB2 785 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ACER1Q8TDN7 264 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SYTL5Q8TDW5 730 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 GRK7Q8WTQ7 553 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GTF3C2Q8WUA4 911 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 CLEC4DQ8WXI8 215 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GJA10Q969M2 543 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 NT5C1BQ96P26 610 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 TLR10Q9BXR5 811 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 TAF1DQ9H5J8 278 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 RPAP3Q9H6T3 665 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 ACAD9Q9H845 621 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 KMT5AQ9NQR1 393 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ZNF277Q9NRM2 450 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 HOMER3Q9NSC5 361 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 HSPBP1Q9NZL4 362 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 RGL1Q9NZL6 768 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ZNF112Q9UJU3 913 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 PCDHA10Q9Y5I2 948 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ATXN2Q99700 1313 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 FER1L6Q2WGJ9 1857 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 A0A0U1RQJ8 604 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CLIC2O15247 247 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SRGAP2O75044 1071 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 HEXIM1O94992 359 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 NMT1P30419 496 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 SLC1A1P43005 524 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 LMAN1P49257 510 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 MXI1P50539 228 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GPC5P78333 572 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 RAD51AP2Q09MP3 1159 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GRM1Q13255 1194 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 BIRC3Q13489 604 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 FAM102BQ5T8I3 360 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 LIN9Q5TKA1 542 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 HOOK3Q86VS8 718 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GPD1LQ8N335 351 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ZNF280CQ8ND82 737 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SLC30A5Q8TAD4 765 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 PIGOQ8TEQ8 1089 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ATRIPQ8WXE1 791 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CARD9Q9H257 536 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNF38-203ENST00000353739 CD2APQ9Y5K6 639 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 KRIT1O00522 736 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 PODXLO00592 558 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 WNT10BO00744 389 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 EVI5O60447 810 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 TLR2O60603 784 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ARP10275 920 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SLC9A1P19634 815 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CHRNA3P32297 505 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 DSG3P32926 999 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CASP5P51878 434 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ARID5AQ03989 594 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 EPC2Q52LR7 807 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SND1Q7KZF4 910 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNF38-203ENST00000353739 BBOF1Q8ND07 529 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SH3GL2Q99962 352 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 DNAI2Q9GZS0 605 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 TMEM39BQ9GZU3 492 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SEPT11Q9NVA2 429 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 MTRF1LQ9UGC7 380 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 ADAMTS1Q9UHI8 967 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 PGAP2Q9UHJ9 254 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 TMEM59LQ9UK28 342 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 STXBP5LQ9Y2K9 1186 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ZHX2Q9Y6X8 837 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 A0A0G2JMZ2 1700 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 A0A087X0T9 212 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 PHF20L1A8MW92 1017 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CEP104O60308 925 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FAM228BP0C875 321 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CAPN2P17655 700 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 VCAM1P19320 739 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 TBXAS1P24557 533 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 KLRC1P26715 233 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 ICAM3P32942 547 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 HSPA9P38646 679 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 GPC3P51654 580 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 BACE1P56817 501 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CAV1Q03135 178 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 RRP1BQ14684 758 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 KYAT1Q16773 422 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 AGBL2Q5U5Z8 902 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 ARMC9Q7Z3E5 817 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 HAUS6Q7Z4H7 955 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms