RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 BFSP1Q12934 665 aa15.08■□□□□ 0.01
TRIM4-201ENST00000349062 IRF2BP2Q7Z5L9 587 aa15.08■□□□□ 0.01
TRIM4-201ENST00000349062 CCDC60Q8IWA6 550 aaPredicted RBP15.08■□□□□ 0.01
TRIM4-201ENST00000349062 SPATA4Q8NEY3 305 aa15.08■□□□□ 0.01
TRIM4-201ENST00000349062 NSUN6Q8TEA1 469 aaKnown RBP15.08■□□□□ 0.01
TRIM4-201ENST00000349062 ZNF862O60290 1169 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 IVLP07476 585 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 ACOT2P49753 483 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 VAMP7P51809 220 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 ZNF211Q13398 564 aaPredicted RBP15.08■□□□□ 0
TRIM4-201ENST00000349062 VGLL4Q14135 290 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 HLTFQ14527 1009 aaKnown RBP eCLIP15.08■□□□□ 01e-9■■■□□ 17.9
TRIM4-201ENST00000349062 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
TRIM4-201ENST00000349062 BSNDQ8WZ55 320 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 ACCSQ96QU6 501 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 FIZ1Q96SL8 496 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 TBC1D22BQ9NU19 505 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 GPRC5DQ9NZD1 345 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 NAGPAQ9UK23 515 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 PCDHA10Q9Y5I2 948 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 CSADQ9Y600 493 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 SMTNP53814 917 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 C8orf74Q6P047 294 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 TRIM50Q86XT4 487 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 DHX38Q92620 1227 aaKnown RBP15.08■□□□□ 0
TRIM4-201ENST00000349062 TEX13BQ9BXU2 312 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 STK24Q9Y6E0 443 aa15.08■□□□□ 0
TRIM4-201ENST00000349062 H2AFZP0C0S5 128 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 RPS12P25398 132 aaKnown RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 NPTX2P47972 431 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 POLGP54098 1239 aaPredicted RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 OSTNP61366 133 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 BIRC3Q13489 604 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 TRADDQ15628 312 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 PAPD7Q5XG87 772 aaKnown RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 PHLDB3Q6NSJ2 640 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 H2AFVQ71UI9 128 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 PEX26Q7Z412 305 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 CREG2Q8IUH2 290 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 JPH1Q9HDC5 661 aaPredicted RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 LRRIQ3A6PVS8 624 aaPredicted RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 PLS3P13797 630 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 PRKCEQ02156 737 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 RPS6KA1Q15418 735 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 XXYLT1Q8NBI6 393 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 KLRG1Q96E93 195 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 ACBD3Q9H3P7 528 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 GALCP54803 685 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 SP2Q02086 613 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 GUCY2DQ02846 1103 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 ACAD9Q9H845 621 aa15.07■□□□□ 0
TRIM4-201ENST00000349062 ZNF214Q9UL59 606 aaPredicted RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
TRIM4-201ENST00000349062 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 SSU72P8A0A1W2PR75 194 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 DDX3XO00571 662 aaKnown RBP eCLIP15.06■□□□□ 02e-6■□□□□ 9.5
TRIM4-201ENST00000349062 RNF40O75150 1001 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 CSDE1O75534 798 aaKnown RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 ADRB2P07550 413 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 HNRNPH3P31942 346 aaKnown RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 DSG3P32926 999 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 MXI1P50539 228 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 ACTR2P61160 394 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 CETN1Q12798 172 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 FHDC1Q9C0D6 1143 aaPredicted RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 SIX2Q9NPC8 291 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 ODF2LQ9ULJ1 636 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 L1RE1Q9UN81 338 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 GRID2IPA4D2P6 1211 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 IRF6O14896 467 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 CYP26A1O43174 497 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 TNNI1P19237 187 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 CNGA1P29973 690 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 NF2P35240 595 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 IGBP1P78318 339 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 ASTE1Q2TB18 679 aaPredicted RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 ZBTB33Q86T24 672 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 VSIG10LQ86VR7 867 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 GLG1Q92896 1179 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 ZBTB45Q96K62 511 aaPredicted RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 MOV10L1Q9BXT6 1211 aaKnown RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 NUCKS1Q9H1E3 243 aaKnown RBP15.06■□□□□ 0
TRIM4-201ENST00000349062 SLC9A2Q9UBY0 812 aa15.06■□□□□ 0
TRIM4-201ENST00000349062 SPDYE16A6NNV3 312 aaPredicted RBP15.05■□□□□ 0
TRIM4-201ENST00000349062 FZD9O00144 591 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 SRGAP2CP0DJJ0 459 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 GJC1P36383 396 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 SLC30A5Q8TAD4 765 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 BTBD6Q96KE9 485 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 UBXN6Q9BZV1 441 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 CYP39A1Q9NYL5 469 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 CTTNBP2NLQ9P2B4 639 aa15.05■□□□□ 0
TRIM4-201ENST00000349062 RGS20O76081 388 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 LIG3P49916 1009 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 CDR1P51861 262 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 CDK17Q00537 523 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms