RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 POU5F1BQ06416 359 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 RBL2Q08999 1139 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 KCNMA1Q12791 1236 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 KIF22Q14807 665 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 MFSD14CQ5VZR4 134 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 EFCAB12Q6NXP0 572 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 TLK2Q86UE8 772 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 SRRDQ9UH36 339 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 ARMCX3Q9UH62 379 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 EXOC7Q9UPT5 735 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 TRPC6Q9Y210 931 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 SIK3Q9Y2K2 1263 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
ECM1-201ENST00000346569 STYXL1Q9Y6J8 313 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 K7ERI5 159 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 GPR25O00155 361 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 PIGRP01833 764 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 GYPCP04921 128 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 AKR1A1P14550 325 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CCZ1BP86790 482 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 CACNB2Q08289 660 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 LAMTOR4Q0VGL1 99 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CAPSQ13938 189 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 MARCH8Q5T0T0 291 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 LRRC71Q8N4P6 559 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CBWD1Q9BRT8 395 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 SUGCTQ9HAC7 445 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 SUCLA2Q9P2R7 463 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 ZNF215Q9UL58 517 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.03□□□□□ -0.48
ECM1-201ENST00000346569 HTTP42858 3142 aa12.02□□□□□ -0.48
ECM1-201ENST00000346569 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 AKR1B15C9JRZ8 316 aaPredicted RBP12.02□□□□□ -0.49
ECM1-201ENST00000346569 F2P00734 622 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 EPB41P11171 864 aaKnown RBP12.02□□□□□ -0.49
ECM1-201ENST00000346569 GARTP22102 1010 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 HOXD10P28358 340 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 CASP14P31944 242 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 FXR1P51114 621 aaKnown RBP eCLIP12.02□□□□□ -0.49
ECM1-201ENST00000346569 CYP2J2P51589 502 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 ADKP55263 362 aaKnown RBP12.02□□□□□ -0.49
ECM1-201ENST00000346569 GJA9P57773 515 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 ADAM17P78536 824 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 GOLGA8FQ08AF8 430 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 GOLGA8DPQ0D2H9 430 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 TRIM32Q13049 653 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 SYCP1Q15431 976 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 FIGNQ5HY92 759 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 CDCA2Q69YH5 1023 aaPredicted RBP12.02□□□□□ -0.49
ECM1-201ENST00000346569 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 MTHFD1LQ6UB35 978 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 PPFIBP1Q86W92 1011 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 TMEM139Q8IV31 216 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 FAM186BQ8IYM0 893 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 RETREG2Q8NC44 543 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 PSPC1Q8WXF1 523 aaKnown RBP12.02□□□□□ -0.49
ECM1-201ENST00000346569 SLC35C1Q96A29 364 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
ECM1-201ENST00000346569 FBXL18Q96ME1 805 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 AP5M1Q9H0R1 490 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 PCIF1Q9H4Z3 704 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 PYCARDQ9ULZ3 195 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 CAPN11Q9UMQ6 739 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 FRMD4BQ9Y2L6 1034 aa12.02□□□□□ -0.49
ECM1-201ENST00000346569 ZSWIM8A7E2V4 1837 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 TTC26A0AVF1 554 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 LRRIQ4A6NIV6 560 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 PES1O00541 588 aaKnown RBP12.01□□□□□ -0.49
ECM1-201ENST00000346569 SEPT4O43236 478 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 EXOC3O60645 756 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 MSCO60682 206 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 FECHP22830 423 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
ECM1-201ENST00000346569 CPT1AP50416 773 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 EFNA5P52803 228 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 TRIM14Q14142 442 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 FKBP15Q5T1M5 1219 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
ECM1-201ENST00000346569 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 ZSWIM2Q8NEG5 633 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 CD99L2Q8TCZ2 262 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 ZBTB10Q96DT7 871 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 PANX2Q96RD6 677 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 NUP58Q9BVL2 599 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 NFKBIZQ9BYH8 718 aa12.01□□□□□ -0.49
ECM1-201ENST00000346569 CCDC113Q9H0I3 377 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms