RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 NR1H3Q13133 447 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 WTAPQ15007 396 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 TCEAL6Q6IPX3 200 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 RNF207Q6ZRF8 634 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 NANOS1Q8WY41 292 aaKnown RBP13.15□□□□□ -0.3
ATXN3-201ENST00000340660 GLG1Q92896 1179 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
ATXN3-201ENST00000340660 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
ATXN3-201ENST00000340660 H3BRB1 525 aa13.14□□□□□ -0.31
ATXN3-201ENST00000340660 SORBS3O60504 671 aa13.14□□□□□ -0.31
ATXN3-201ENST00000340660 CSRP1P21291 193 aaKnown RBP13.14□□□□□ -0.31
ATXN3-201ENST00000340660 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
ATXN3-201ENST00000340660 C15orf39Q6ZRI6 1047 aa13.14□□□□□ -0.31
ATXN3-201ENST00000340660 AUTS2Q8WXX7 1259 aa13.14□□□□□ -0.31
ATXN3-201ENST00000340660 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
ATXN3-201ENST00000340660 FTHL17Q9BXU8 183 aa13.14□□□□□ -0.31
ATXN3-201ENST00000340660 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
ATXN3-201ENST00000340660 WDR6Q9NNW5 1121 aaKnown RBP13.14□□□□□ -0.31
ATXN3-201ENST00000340660 CLUHO75153 1309 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 FBN2P35556 2912 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
ATXN3-201ENST00000340660 SHISA7A6NL88 538 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 EPN2O95208 641 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 CXCL14O95715 111 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 LAMP2P13473 410 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 KRT17Q04695 432 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
ATXN3-201ENST00000340660 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 CCDC8Q9H0W5 538 aaPredicted RBP13.13□□□□□ -0.31
ATXN3-201ENST00000340660 NOTCH2Q04721 2471 aa13.13□□□□□ -0.31
ATXN3-201ENST00000340660 NCAM2O15394 837 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 PLA2G6O60733 806 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 CNR2P34972 360 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
ATXN3-201ENST00000340660 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 CEP95Q96GE4 821 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 CHRDQ9H2X0 955 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 TMX1Q9H3N1 280 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 ARMT1Q9H993 441 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 PCDHB7Q9Y5E2 793 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 CDY2AQ9Y6F7 541 aa13.12□□□□□ -0.31
ATXN3-201ENST00000340660 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 PPM1AP35813 382 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 SATB1Q01826 763 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 PPP2R5DQ14738 602 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 CEP68Q76N32 757 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
ATXN3-201ENST00000340660 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 STAMQ92783 540 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 SPATA33Q96N06 139 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
ATXN3-201ENST00000340660 NBPF19A0A087WUL8 3843 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 B4DLN1 442 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 LGALS2P05162 132 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 GNAT1P11488 350 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 PDE6AP16499 860 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 SLC1A4P43007 532 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
ATXN3-201ENST00000340660 FGD1P98174 961 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 DAB2IPQ5VWQ8 1189 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 FGF14Q92915 247 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 ZNF558Q96NG5 402 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 NELL2Q99435 816 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 ZBP1Q9H171 429 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 RANBP17Q9H2T7 1088 aaKnown RBP13.1□□□□□ -0.31
ATXN3-201ENST00000340660 CCDC86Q9H6F5 360 aaKnown RBP13.1□□□□□ -0.31
ATXN3-201ENST00000340660 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 PTPRCP08575 1304 aa13.1□□□□□ -0.31
ATXN3-201ENST00000340660 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 FGFR1P11362 822 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 MCCP23508 829 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 RAP1GAPP47736 663 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 CCR3P51677 355 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
ATXN3-201ENST00000340660 MCCD1P59942 119 aaPredicted RBP13.09□□□□□ -0.31
ATXN3-201ENST00000340660 PARM1Q6UWI2 310 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 MDM1Q8TC05 714 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 LOXL4Q96JB6 756 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms