RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 SDE2Q6IQ49 451 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 PBKQ96KB5 322 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 MYCBPQ99417 103 aaPredicted RBP13.49□□□□□ -0.25
XIRP1-201ENST00000340369 POLR3FQ9H1D9 316 aaPredicted RBP13.49□□□□□ -0.25
XIRP1-201ENST00000340369 IGFLR1Q9H665 355 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 DNAJC17Q9NVM6 304 aaKnown RBP13.49□□□□□ -0.25
XIRP1-201ENST00000340369 SLC13A4Q9UKG4 626 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 HPCAL4Q9UM19 191 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 ZNF667Q5HYK9 610 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 BTBD8Q5XKL5 378 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 CEP19Q96LK0 163 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 TXLNGQ9NUQ3 528 aa13.49□□□□□ -0.25
XIRP1-201ENST00000340369 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
XIRP1-201ENST00000340369 HSPA8P11142 646 aaKnown RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 ARL13BQ3SXY8 428 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 BBS9Q3SYG4 887 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 MCPH1Q8NEM0 835 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 FAM81BQ96LP2 452 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 PACSIN2Q9UNF0 486 aaPredicted RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 PCDHA13Q9Y5I0 950 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 PDHXO00330 501 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 GPC3P51654 580 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 SLMAPQ14BN4 828 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 C2orf40Q9H1Z8 148 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 GLI2P10070 1586 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 CCHCR1Q8TD31 782 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 HACD3Q9P035 362 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 SH2B2O14492 632 aaPredicted RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 CDC25AP30304 524 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 GRIK1P39086 918 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 OCRLQ01968 901 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 TAF11Q15544 211 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 ZNF394Q53GI3 561 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 DYDC2Q96IM9 177 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 SERPING1P05155 500 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 DR1Q01658 176 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 CXCL9Q07325 125 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 KIF19Q2TAC6 998 aa13.48□□□□□ -0.25
XIRP1-201ENST00000340369 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
XIRP1-201ENST00000340369 ARHGDIAP52565 204 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 FKBP3Q00688 224 aaKnown RBP13.47□□□□□ -0.25
XIRP1-201ENST00000340369 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 TKFCQ3LXA3 575 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 TMEM259Q4ZIN3 620 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 CYP21A2P08686 494 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
XIRP1-201ENST00000340369 GLB1LQ6UWU2 654 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 GPC2Q8N158 579 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 EMILIN3Q9NT22 766 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 ABCA9Q8IUA7 1624 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 PHLPP2Q6ZVD8 1323 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 STAG3L1P0CL83 205 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 TMED1Q13445 227 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 BFSP2Q13515 415 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 KLC3Q6P597 504 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
XIRP1-201ENST00000340369 RASGRF2O14827 1237 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 ZBED1O96006 694 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 CYBBP04839 570 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SFNP31947 248 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 DCAF4L1Q3SXM0 396 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 PPP1R2P3Q6NXS1 205 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 HHIPL2Q6UWX4 724 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SEPT5Q99719 369 aaPredicted RBP13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SCOCQ9UIL1 159 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 ANGPTL2Q9UKU9 493 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 CHEK2O96017 543 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 ATICP31939 592 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
XIRP1-201ENST00000340369 DGKZQ13574 1117 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 CNOT10Q9H9A5 744 aaKnown RBP13.47□□□□□ -0.25
XIRP1-201ENST00000340369 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 STRIP2Q9ULQ0 834 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 SUFUQ9UMX1 484 aa13.47□□□□□ -0.25
XIRP1-201ENST00000340369 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 LDHAP00338 332 aaKnown RBP13.46□□□□□ -0.25
XIRP1-201ENST00000340369 ESRRAP11474 423 aaPredicted RBP13.46□□□□□ -0.25
XIRP1-201ENST00000340369 NSUN7Q8NE18 718 aaKnown RBP13.46□□□□□ -0.25
XIRP1-201ENST00000340369 TMEM260Q9NX78 707 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 SLC16A4O15374 487 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 MMP1P03956 469 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 IRF1P10914 325 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 CYP2C9P11712 490 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 NSUN2Q08J23 767 aaKnown RBP eCLIP13.46□□□□□ -0.25
XIRP1-201ENST00000340369 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
XIRP1-201ENST00000340369 NR5A1Q13285 461 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms