RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 RNF169Q8NCN4 708 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 DEPTORQ8TB45 409 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 PGBD4Q96DM1 585 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 CCDC51Q96ER9 411 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 TRAIPQ9BWF2 469 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 AAASQ9NRG9 546 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 AGPAT5Q9NUQ2 364 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 KCND2Q9NZV8 630 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 CCDC39Q9UFE4 941 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-202ENST00000338602 MYO9BQ13459 2157 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 PTPRSQ13332 1948 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 ARID2Q68CP9 1835 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 PHLPP2Q6ZVD8 1323 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 F13A1P00488 732 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 MARCKSP29966 332 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 CTNNB1P35222 781 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 GRB10Q13322 594 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 PTPAQ15257 358 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 PAN2Q504Q3 1202 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 EPC2Q52LR7 807 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 FOXD4L5Q5VV16 416 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 NOTUMQ6P988 496 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 TMEM192Q8IY95 271 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 CRIPAKQ8N1N5 446 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 FOXD4L4Q8WXT5 416 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 PLIN2Q99541 437 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 TMEM117Q9H0C3 514 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 PRMT7Q9NVM4 692 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 CFAP45Q9UL16 551 aa12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
SLC28A1-202ENST00000338602 TBKBP1A7MCY6 615 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 ARHGEF15O94989 841 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 BMPR1AP36894 532 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 NASPP49321 788 aaPredicted RBP12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 EFNA5P52803 228 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 MBTD1Q05BQ5 628 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 MAPK6Q16659 721 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 PTPROQ16827 1216 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 RINT1Q6NUQ1 792 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 HACE1Q8IYU2 909 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 PRIMPOLQ96LW4 560 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 PNMA5Q96PV4 448 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 C17orf80Q9BSJ5 609 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 C11orf84Q9BUA3 381 aaPredicted RBP12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 PLVAPQ9BX97 442 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 CSRNP2Q9H175 543 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 RC3H2Q9HBD1 1191 aaKnown RBP12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 FAM105AQ9NUU6 356 aa12.52□□□□□ -0.41
SLC28A1-202ENST00000338602 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 CARNS1A5YM72 827 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 SPTLC2O15270 562 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 ZNF623O75123 536 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 YEATS4O95619 227 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 FGFR1P11362 822 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 GUCY2CP25092 1073 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 SMTNP53814 917 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 DMP1Q13316 513 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 GPM6BQ13491 265 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 CSPP1Q1MSJ5 1256 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 NAALADL2Q58DX5 795 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 GLB1LQ6UWU2 654 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 C1orf186Q6ZWK4 172 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 UBN1Q9NPG3 1134 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 PCDHB12Q9Y5F1 795 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 ATP6V1DQ9Y5K8 247 aa12.51□□□□□ -0.41
SLC28A1-202ENST00000338602 H3BNC9 293 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 K7ERI5 159 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 RFXAPO00287 272 aa12.5□□□□□ -0.41
SLC28A1-202ENST00000338602 TSPAN1O60635 241 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms