RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ANTXR1Q9H6X2 564 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ASNSD1Q9NWL6 643 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 CNOT8Q9UFF9 292 aaKnown RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 PLAAQ9Y263 795 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 SNX24Q9Y343 169 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 NR1D1P20393 614 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 RFX3P48380 749 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 GYS2P54840 703 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 CCDC142Q17RM4 750 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ADCK5Q3MIX3 580 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 BEND6Q5SZJ8 279 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF746Q6NUN9 644 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 BHMTQ93088 406 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 MAGEB5Q9BZ81 275 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 ZFP69BQ9UJL9 534 aa12.52□□□□□ -0.41
SHANK2-201ENST00000338508 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-201ENST00000338508 MYO1GB0I1T2 1018 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 PRR23D1E9PI22 279 aaPredicted RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 NBNO60934 754 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 PRR23D2P0DMB1 279 aaPredicted RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 CUL1Q13616 776 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 TRIM33Q9UPN9 1127 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 PALMO75781 387 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 DCTN3O75935 186 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 APOA4P06727 396 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 KRT17Q04695 432 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 AK8Q96MA6 479 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 SASH1O94885 1247 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 ZBTB7AO95365 584 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 KRT4P19013 534 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 GPS1Q13098 491 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF235Q14590 738 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 KRT31Q15323 416 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 SLFN12LQ6IEE8 588 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 KRT37O76014 449 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 PCYT1AP49585 367 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 SLC16A1P53985 500 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 ARL4CP56559 192 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 GTF2H3Q13889 308 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 UNC45AQ9H3U1 944 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 USE1Q9NZ43 259 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 ADGRA2Q96PE1 1338 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 KPNA7A9QM74 516 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 PHKA2P46019 1235 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 CDK8P49336 464 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 PRKCQQ04759 706 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
SHANK2-201ENST00000338508 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 TOPORSQ9NS56 1045 aaPredicted RBP12.51□□□□□ -0.41
SHANK2-201ENST00000338508 CHL1O00533 1208 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 APBA1Q02410 837 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 VEPH1Q14D04 833 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 HEATR6Q6AI08 1181 aaKnown RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 SWSAP1Q6NVH7 229 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 C5orf58C9J3I9 102 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 TLR2O60603 784 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 MMEP08473 750 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 NEK2P51955 445 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 CSE1LP55060 971 aaKnown RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 SPATA33Q96N06 139 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 KLHL11Q9NVR0 708 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 DONSONQ9NYP3 566 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 MAD2L2Q9UI95 211 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 DNAJC12Q9UKB3 198 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 AGRPO00253 132 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 SGO1Q5FBB7 561 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 ALS2CLQ60I27 953 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 ARHGEF10O15013 1369 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 GFAPP14136 432 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 GRIN1Q05586 938 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 BTBD8Q5XKL5 378 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 SH3RF3Q8TEJ3 882 aaPredicted RBP12.5□□□□□ -0.41
SHANK2-201ENST00000338508 USP33Q8TEY7 942 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 MAGEF1Q9HAY2 307 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
SHANK2-201ENST00000338508 MRPS15P82914 257 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms